Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00004199001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00004199001
Family
MYB-related
3D structure (top 5)
1HST 1UHM 1UST 1USS 1GHC
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Carica papaya

evm.TU.supercontig_6.10 Score: 1

Expression data

Expressed Sequence Tags

At.26646
Arabidopsis thaliana telomere repeat binding factor 3 (TRB3) mRNA, complete cds /cds=p(221,1108) /gb=U83839
At.27250
Arabidopsis thaliana ATTRB1/TRB1 (TELOMERE REPEAT BINDING FACTOR 1); DNA binding (ATTRB1/TRB1) mRNA, complete cds /cds=p(304,1206) /gb=NM_202269
At.7636
Arabidopsis thaliana ATTRB2/TRB2 (TELOMERE REPEAT BINDING FACTOR 2); DNA binding / transcription factor (ATTRB2/TRB2) mRNA, complete cds /cds=p(255,1154) /gb=NM_180955
Mtr.17478
METB235TF JCVI-MT3 Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=EY477379
Mtr.7648
META350TF JCVI-MT3 Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=EY474260
Os.27252
Oryza sativa Japonica Group cDNA clone:001-200-G11, full insert sequence /gb=AK105660
Os.8369
Oryza sativa Japonica Group cDNA clone:J033117F01, full insert sequence /gb=AK103040
Sbi.9613
WOUND1_39_E08.g1_A002 Wounded leaves Sorghum bicolor cDNA clone WOUND1_39_E08_A002 5', mRNA sequence /clone=WOUND1_39_E08_A002 /clone_end=5' /gb=CN146348 /gi=45986221
Vvi.18203
CSECS114B01_PREn0028 CabSau Normalised Berry Fruit Set Stage 28 (PREn0028) Vitis vinifera cDNA clone CSECS114B01 3', mRNA sequence /clone=CSECS114B01 /clone_end=3' /gb=CO818391
Vvi.8843
WIN0517.C21_L21 Cab Sauv flower, leaf and root normalized (WIN05) Vitis vinifera cDNA clone WIN0517_L21 3', mRNA sequence /clone=WIN0517_L21 /clone_end=3' /gb=EC939798

Domain Architecture

Myb_DNA-binding PF00249 GSVIVP00004199001
DomainStartEndBit scoreE-value
Myb_DNA-binding55732.12.2e-06
Linker_histone125187583.5e-14

Sequences