Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00004704001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00004704001
Family
MYB-related
3D structure (top 5)
2ELK 1GVD 2FC7 2DIM 2YUS
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Carica papaya

evm.TU.supercontig_73.50 Score: 1

Populus trichocarpa

667101 Score: 1

Zea mays

GRMZM2G129817_P02 Score: 1

Expression data

Expressed Sequence Tags

At.18344
Arabidopsis thaliana ADA2A (Arabidopsis adaptor 2A homolog); DNA binding / transcription factor (ADA2A) mRNA, complete cds /cds=p(333,1766) /gb=NM_202522
At.4412
Arabidopsis thaliana ADA2B (PROPORZ1); DNA binding / transcription factor (ADA2B) mRNA, complete cds /cds=p(312,1775) /gb=NM_117737
Os.59266
Oryza sativa Japonica Group cDNA clone:J023128E10, full insert sequence /cds=p(258,1961) /gb=AK072597
Ppa.1158
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_173268) mRNA, complete cds /cds=p(108,1640) /gb=XM_001784916
Ppa.6392
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_116913) mRNA, complete cds /cds=p(1,1728) /gb=XM_001755447
Pth.11830
F099P79.3pR Populus flower cDNA library Populus trichocarpa cDNA clone F099P79 3', mRNA sequence /clone=F099P79 /clone_end=3' /gb=CK091432
Sbi.8578
RHOH1_44_H08.g1_A002 Acid- and alkaline-treated roots Sorghum bicolor cDNA clone RHOH1_44_H08_A002 5', mRNA sequence /clone=RHOH1_44_H08_A002 /clone_end=5' /gb=CN130944 /gi=45959951

Domain Architecture

ZZ PF00569 GSVIVP00004704001
DomainStartEndBit scoreE-value
ZZ448942.61.5e-09
Myb_DNA-binding10515146.41.1e-10

Sequences