Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00006194001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00006194001
Family
SET
3D structure (top 5)
2PB7 1H3I 2R3A 1ML9 3F9X
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

488222 Score: 1

Arabidopsis thaliana

AT5G13960.1 Score: 1

Chlorella sp. NC64A

142107 Score: 1

Coccomyxa sp. C-169

59484 Score: 1

Oryza sativa subsp. japonica

LOC_Os01g70220.1 Score: 1

Physcomitrella patens

30594 Score: 1

Populus trichocarpa

409038 Score: 1

Sorghum bicolor

4881238 Score: 1

Selaginella moellendorffii

79965 Score: 1

Zea mays

GRMZM2G054380_P04 Score: 1
GRMZM2G098418_P01 Score: 1

Expression data

Expressed Sequence Tags

At.8330
Arabidopsis thaliana At5g13960 mRNA sequence /gb=AY080822
Os.31816
Oryza sativa Japonica Group cDNA clone:002-114-E02, full insert sequence /gb=AK106700
Ppa.21390
Physcomitrella patens subsp. patens histone methyltransferase Su3-9 group (SDG1519) mRNA, complete cds /cds=p(1,1638) /gb=XM_001775288
Vvi.21434
WIN1129.C21_B16 Muscat Hamburg pre-veraison berry normalized (WIN11) Vitis vinifera cDNA clone WIN1129_B16 3', mRNA sequence /clone=WIN1129_B16 /clone_end=3' /gb=EC986907

Domain Architecture

YDG_SRA PF02182 GSVIVP00006194001
DomainStartEndBit scoreE-value
YDG_SRA14175296.94.4e-86
Pre-SET198297103.47.7e-28
SET299457149.51e-41

Sequences