Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00006691001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00006691001
Family
RWP-RK
3D structure (top 5)
1IP9 1WJ6
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

474894 Score: 1

Arabidopsis thaliana

AT1G64530.1 Score: 1

Coccomyxa sp. C-169

61987 Score: 1

Oryza sativa subsp. japonica

LOC_Os01g13540.1 Score: 1

Populus trichocarpa

413996 Score: 1

Sorghum bicolor

5052341 Score: 1

Zea mays

GRMZM2G077133_P01 Score: 1

Expression data

Expressed Sequence Tags

At.27886
Arabidopsis thaliana RWP-RK domain-containing protein (AT1G64530) mRNA, complete cds /cds=p(160,2685) /gb=NM_105128
At.32386
Arabidopsis thaliana RWP-RK domain-containing protein (AT4G24020) mRNA, complete cds /cds=p(153,3032) /gb=NM_118534
Os.3838
Oryza sativa (japonica cultivar-group) Os01g0236700 (Os01g0236700) mRNA, complete cds /cds=p(255,3071) /gb=NM_001049065
Ptp.1008
C057P29.3pR Populus strain T89 leaves Populus tremula x Populus tremuloides cDNA clone C057P29 3', mRNA sequence /clone=C057P29 /clone_end=3' /gb=CK090032
Sbi.9647
ABA1_1_B11.g1_A012 Abscisic acid-treated seedlings Sorghum bicolor cDNA clone ABA1_1_B11_A012 5', mRNA sequence /clone=ABA1_1_B11_A012 /clone_end=5' /gb=CB924743 /gi=30161014
Vvi.17311
WIN0512.C21_C11 Cab Sauv flower, leaf and root normalized (WIN05) Vitis vinifera cDNA clone WIN0512_C11 3', mRNA sequence /clone=WIN0512_C11 /clone_end=3' /gb=EC936328

Domain Architecture

RWP-RK PF02042 GSVIVP00006691001
DomainStartEndBit scoreE-value
RWP-RK566617106.68.5e-29
PB175984190.46.4e-24

Sequences