Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00006968001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00006968001
Family
NAC
3D structure (top 5)
1UT7
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

909271 Score: 1

Arabidopsis thaliana

AT5G13180.1 Score: 1

Carica papaya

evm.TU.supercontig_99.62 Score: 1

Oryza sativa subsp. japonica

LOC_Os12g29330.1 Score: 1

Populus trichocarpa

830927 Score: 1

Sorghum bicolor

5059521 Score: 1

Expression data

Expressed Sequence Tags

At.10079
Arabidopsis thaliana ANAC083 (Arabidopsis NAC domain containing protein 83); transcription factor (ANAC083) mRNA, complete cds /cds=p(72,830) /gb=NM_121321
At.10430
Arabidopsis thaliana At1g61110 mRNA for unknown protein, complete cds, clone: RAFL19-05-K20 /cds=p(117,1088) /gb=AK117878
At.17802
Arabidopsis thaliana ANAC032 (Arabidopsis NAC domain containing protein 32); transcription factor (ANAC032) mRNA, complete cds /cds=p(76,837) /gb=NM_106394
At.24919
Arabidopsis thaliana unknown protein (At1g69490) mRNA, complete cds /cds=p(94,900) /gb=AF360201
At.47520
Arabidopsis thaliana ANAC041 (Arabidopsis NAC domain containing protein 41); transcription factor (ANAC041) mRNA, complete cds /cds=p(90,896) /gb=NM_128908
Mtr.13202
MTYEA18TF JCVI-MT1 Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=EV260652
Mtr.14197
NF047H10EC1F1091 Elicited cell culture Medicago truncatula cDNA clone NF047H10EC 5', mRNA sequence /clone=NF047H10EC /clone_end=5' /gb=BF648589
Mtr.22324
EST315871 DSIR Medicago truncatula cDNA clone pDSIR-30G5, mRNA sequence /clone=pDSIR-30G5 /gb=AW560823
Os.17286
Oryza sativa Japonica Group cDNA, clone: J100075D15, full insert sequence /cds=p(172,1350) /gb=AK243514
Os.23110
Oryza sativa Japonica Group cDNA, clone: J100046N20, full insert sequence /cds=p(124,906) /gb=AK243244
Os.36437
Oryza sativa Japonica Group cDNA clone:001-115-A08, full insert sequence /gb=AK063406
Os.4384
Oryza sativa (japonica cultivar-group) NAC protein mRNA, complete cds /cds=p(105,1061) /gb=AY986504
Os.79631
Oryza sativa (japonica cultivar-group) Os12g0123700 (Os12g0123700) mRNA, complete cds /cds=p(1,1182) /gb=NM_001072566
Pba.8461
WS02520.B21_L14 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02520_L14 3', mRNA sequence /clone=WS02520_L14 /clone_end=3' /gb=DT482765
Pth.8461
WS0254.B21_B14 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS0254_B14 3', mRNA sequence /clone=WS0254_B14 /clone_end=3' /gb=CV244231
Ptp.5926
X042G05 Populus wood cDNA library Populus tremula x Populus tremuloides cDNA 5 prime, mRNA sequence /clone_end=5' /gb=BU896583
Sbi.1157
RHOH1_8_B12.g1_A002 Acid- and alkaline-treated roots Sorghum bicolor cDNA clone RHOH1_8_B12_A002 5', mRNA sequence /clone=RHOH1_8_B12_A002 /clone_end=5' /gb=CN125046 /gi=45949087
Vvi.7538
VV_PEd0017e01.g1 Vitis vinifera cv. perlette LibD Vitis vinifera cDNA, mRNA sequence /gb=EV241369

Domain Architecture

NAM PF02365 GSVIVP00006968001
DomainStartEndBit scoreE-value
NAM14139295.79.9e-86

Sequences