Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00007494001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00007494001
Family
C2H2
3D structure (top 5)
1BR2 1KK8 2V26 1LKX 2DFS
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

At.21949
Arabidopsis thaliana MYA1 (ARABIDOPSIS MYOSIN); motor/ protein binding (MYA1) mRNA, complete cds /cds=p(151,4713) /gb=NM_101620
At.28666
Arabidopsis thaliana XIJ (Myosin-like protein XIJ) (XIJ) mRNA, complete cds /cds=p(1,3729) /gb=NM_115678
At.31603
Arabidopsis thaliana XI-I (Myosin-like protein XI-I); motor/ protein binding (XI-I) mRNA, complete cds /cds=p(177,4745) /gb=NM_119474
At.31995
Arabidopsis thaliana XIH (Myosin-like protein XIH) (XIH) mRNA, complete cds /cds=p(283,4833) /gb=NM_119015
At.37956
Arabidopsis thaliana XID (Myosin-like protein XID); motor/ protein binding (XID) mRNA, complete cds /cds=p(1,5313) /gb=NM_128883
At.42257
Arabidopsis thaliana XIC (Myosin-like protein XIC); motor/ protein binding (XIC) mRNA, complete cds /cds=p(1,4617) /gb=NM_100746
At.42479
Arabidopsis thaliana XIB (Myosin-like protein XIB) (XIB) mRNA, complete cds /cds=p(1,4503) /gb=NM_100297
At.43864
Arabidopsis thaliana XIK (Myosin-like protein XIK); motor/ protein binding (XIK) mRNA, complete cds /cds=p(1,4638) /gb=NM_122056
At.51478
Arabidopsis thaliana XIA (Myosin-like protein XIA); motor/ protein binding (XIA) mRNA, complete cds /cds=p(1,5193) /gb=NM_100339
At.52200
Arabidopsis thaliana XIE (Myosin-like protein XIE); motor/ protein binding (XIE) mRNA, complete cds /cds=p(1,4590) /gb=NM_104334
At.52842
Arabidopsis thaliana XIG (Myosin-like protein XIG); motor/ protein binding (XIG) mRNA, complete cds /cds=p(1,4482) /gb=NM_127588
At.53001
Arabidopsis thaliana XIF (Myosin-like protein XIF) (XIF) mRNA, complete cds /cds=p(1,4671) /gb=NM_128748
At.9049
Arabidopsis thaliana MYA2 (ARABIDOPSIS MYOSIN) (MYA2) mRNA, complete cds /cds=p(174,4691) /gb=NM_123757
Cre.16015
Chlamydomonas reinhardtii strain CC-503 cw92 mt+ /cds=p(1,4932) /gb=XM_001697794
Os.25451
Oryza sativa (japonica cultivar-group) Os03g0860700 (Os03g0860700) mRNA, complete cds /cds=p(1,4374) /gb=NM_001058510
Os.4855
Oryza sativa (japonica cultivar-group) myosin XI B (MyoXIB) mRNA, complete cds /cds=p(278,4810) /gb=AY907549
Os.50335
Oryza sativa Japonica Group cDNA clone:J023027A17, full insert sequence /gb=AK069690
Os.58396
Oryza sativa (japonica cultivar-group) myosin heavy chain class XI E2 protein (MyoXIE2) mRNA, complete cds /cds=p(1,4671) /gb=AY374516
Os.59081
Oryza sativa (japonica cultivar-group) Os02g0777700 (Os02g0777700) mRNA, complete cds /cds=p(1,4311) /gb=NM_001054826
Ppa.9182
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_189333) mRNA, complete cds /cds=p(184,4596) /gb=XM_001770902

Domain Architecture

Myosin_head PF00063 GSVIVP00007494001
DomainStartEndBit scoreE-value
Myosin_head8664998.23.4e-297
IQ728748283.8e-05
IQ77679623.10.0012
IQ79981918.40.031
zf-C2H21083110521.80.0029

Sequences