Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00008275001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00008275001
Family
C2H2
3D structure (top 5)
2DLQ 1TF6 2I13 2DMD 1UBD
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Carica papaya

evm.TU.supercontig_752.2 Score: 1

Oryza sativa subsp. japonica

LOC_Os02g36360.1 Score: 1
LOC_Os02g36360.2 Score: 1
LOC_Os02g36360.3 Score: 1

Sorghum bicolor

5055311 Score: 1

Zea mays

GRMZM2G023988_P01 Score: 1
GRMZM2G023988_P02 Score: 1
GRMZM2G023988_P03 Score: 1
GRMZM2G023988_P04 Score: 1

Expression data

Expressed Sequence Tags

At.31036
Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL14-31-P16 /cds=p(63,1184) /gb=AK227740
Hv.21079
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf151p02, mRNA sequence /gb=AK252406
Mtr.13820
NF083B12EC1F1095 Elicited cell culture Medicago truncatula cDNA clone NF083B12EC 5', mRNA sequence /clone=NF083B12EC /clone_end=5' /gb=BF649765
Os.51657
Oryza sativa Japonica Group cDNA clone:001-113-E02, full insert sequence /gb=AK063290
Os.5755
Oryza sativa Japonica Group cDNA clone:J023088A12, full insert sequence /gb=AK071320
Os.75821
Oryza sativa Japonica Group cDNA, clone: J065055P16, full insert sequence /gb=AK287605
Os.76617
Oryza sativa Japonica Group cDNA, clone: J100051N01, full insert sequence /gb=AK243285
Os.79948
Oryza sativa (japonica cultivar-group) Os02g0573000 (Os02g0573000) mRNA, complete cds /cds=p(1,1683) /gb=NM_001053734
Os.8796
Oryza sativa Japonica Group cDNA clone:J023123F03, full insert sequence /cds=p(1944,3512) /gb=AK100840
Sbi.4505
OX1_43_F03.g1_A002 Oxidatively-stressed leaves and roots Sorghum bicolor cDNA clone OX1_43_F03_A002 5', mRNA sequence /clone=OX1_43_F03_A002 /clone_end=5' /gb=CN136531 /gi=45969470
Vvi.18973
VV_PEa25e04.b1 Vitis vinifera cv. perlette LibA Vitis vinifera cDNA, mRNA sequence /gb=EV232186
Vvi.586
VV_PEd18d10.b1 Vitis vinifera cv. perlette LibD Vitis vinifera cDNA, mRNA sequence /gb=EV242897

Domain Architecture

zf-C2H2 PF00096 GSVIVP00008275001
DomainStartEndBit scoreE-value
zf-C2H213715931.24.1e-06

Sequences