Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00008414001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00008414001
Family
CAMTA
3D structure (top 5)
2CXK 1YCS 2VGE 1DCQ 2B0O
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

481093 Score: 1

Arabidopsis thaliana

AT2G22300.1 Score: 1
AT2G22300.2 Score: 1

Oryza sativa subsp. japonica

LOC_Os03g09100.1 Score: 1

Physcomitrella patens

40635 Score: 1

Populus trichocarpa

217493 Score: 1

Sorghum bicolor

5050036 Score: 1

Selaginella moellendorffii

441667 Score: 1

Zea mays

GRMZM2G147487_P01 Score: 1

Expression data

Expressed Sequence Tags

At.26762
Arabidopsis thaliana EICBP.B (ETHYLENE INDUCED CALMODULIN BINDING PROTEIN) (EICBP.B) mRNA, complete cds /cds=p(190,3213) /gb=NM_001125723
At.48505
Arabidopsis thaliana ethylene-responsive calmodulin-binding protein, putative (SR1) (AT2G22300) mRNA, complete cds /cds=p(212,3310) /gb=NM_179692
Hv.902
HVSMEk0022P07f Hordeum vulgare testa/pericarp EST library HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA clone HVSMEk0022P07f, mRNA sequence /clone=HVSMEk0022P07f /gb=BG418518
Mtr.14133
EST611426 KVKC Medicago truncatula cDNA clone pKVKC-10B2, mRNA sequence /clone=pKVKC-10B2 /gb=BQ165557
Mtr.20634
METAO19TF JCVI-MT3 Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=EY476154
Os.25048
Oryza sativa Japonica Group cDNA clone:J033041A20, full insert sequence /gb=AK101479
Os.49503
Oryza sativa (japonica cultivar-group) Os03g0388500 (Os03g0388500) mRNA, partial cds /cds=p(3,896) /gb=NM_001056800
Os.97411
OSJNEf08I05.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA clone OSJNEf08I05 5', mRNA sequence /clone=OSJNEf08I05 /clone_end=5' /gb=CB681818
Sbi.3744
PIC1_43_D12.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum bicolor cDNA, mRNA sequence /gb=BM325344
Vvi.16660
CAbud0005_IIF_C01 Vitis vinifera cv. cabernet sauvignon (Clone 8) Bud - CABUD Vitis vinifera cDNA clone CAbud0005_IIF_C01 5', mRNA sequence /clone=CAbud0005_IIF_C01 /clone_end=5' /gb=CF514573
Vvi.21890
WIN1155.C21_D19 Muscat Hamburg pre-veraison berry normalized (WIN11) Vitis vinifera cDNA clone WIN1155_D19 3', mRNA sequence /clone=WIN1155_D19 /clone_end=3' /gb=EC995429
Vvi.3259
VVTOV175 ovule cDNA library of a seedless grape (Vitis vinifera var.Thomson seedless) Vitis vinifera cDNA 5', mRNA sequence /clone_end=5' /gb=EY255047

Domain Architecture

CG-1 PF03859 GSVIVP00008414001
DomainStartEndBit scoreE-value
CG-1139241199.97e-57
Ank83286439.31.5e-08
Ank87190349.7
IQ1004102420.70.0061
IQ1027104729.11.7e-05

Sequences