Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00010968001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00010968001
Family
SNF2
3D structure (top 5)
3DMQ 1C4O 1Z3I 2FWR 1Z5Z
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

At.49853
Arabidopsis thaliana SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein (AT1G05120) mRNA, complete cds /cds=p(12,2513) /gb=NM_100390
Os.50017
Oryza sativa Japonica Group cDNA clone:J013084I15, full insert sequence /gb=AK066772
Ptp.7358
N011G08.5pR Populus bark cDNA library Populus tremula x Populus tremuloides cDNA clone N011G08 5', mRNA sequence /clone=N011G08 /clone_end=5' /gb=DN495020

Domain Architecture

SNF2_N PF00176 GSVIVP00010968001
DomainStartEndBit scoreE-value
SNF2_N57393155.91.2e-43
zf-C3HC440344230.47.5e-06
Helicase_C51759554.63.7e-13

Sequences