Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00011769001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00011769001
Family
NAC
3D structure (top 5)
1UT7
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

At.10430
Arabidopsis thaliana At1g61110 mRNA for unknown protein, complete cds, clone: RAFL19-05-K20 /cds=p(117,1088) /gb=AK117878
At.11024
Arabidopsis thaliana NAM (Arabidopsis NAC domain containing protein 18); transcription factor (NAM) mRNA, complete cds /cds=p(113,1075) /gb=NM_104166
At.24919
Arabidopsis thaliana unknown protein (At1g69490) mRNA, complete cds /cds=p(94,900) /gb=AF360201
At.42943
Arabidopsis thaliana mRNA for NAM-like protein, complete cds, clone: RAFL14-07-D22 /cds=p(119,1198) /gb=AK227417
Hv.5097
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf97a05, mRNA sequence /gb=AK251058
Hv.6550
Hordeum vulgare subsp. vulgare mRNA for putative NAC transcription factor (nac4 gene) /cds=p(156,992) /gb=AM500853
Mtr.13202
MTYEA18TF JCVI-MT1 Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=EV260652
Mtr.14197
NF047H10EC1F1091 Elicited cell culture Medicago truncatula cDNA clone NF047H10EC 5', mRNA sequence /clone=NF047H10EC /clone_end=5' /gb=BF648589
Mtr.22275
EST1226545 MTY Medicago truncatula cDNA clone MTYAV46, mRNA sequence /clone=MTYAV46 /gb=DW017584
Mtr.22324
EST315871 DSIR Medicago truncatula cDNA clone pDSIR-30G5, mRNA sequence /clone=pDSIR-30G5 /gb=AW560823
Mtr.4556
EST611106 KVKC Medicago truncatula cDNA clone pKVKC-7B8, mRNA sequence /clone=pKVKC-7B8 /gb=BQ165237
Os.17286
Oryza sativa Japonica Group cDNA, clone: J100075D15, full insert sequence /cds=p(172,1350) /gb=AK243514
Os.35020
Oryza sativa Japonica Group cDNA clone:J023011O06, full insert sequence /cds=p(815,1357) /gb=AK069257
Os.36437
Oryza sativa Japonica Group cDNA clone:001-115-A08, full insert sequence /gb=AK063406
Os.4384
Oryza sativa (japonica cultivar-group) NAC protein mRNA, complete cds /cds=p(105,1061) /gb=AY986504
Os.79631
Oryza sativa (japonica cultivar-group) Os12g0123700 (Os12g0123700) mRNA, complete cds /cds=p(1,1182) /gb=NM_001072566
Sbi.1157
RHOH1_8_B12.g1_A002 Acid- and alkaline-treated roots Sorghum bicolor cDNA clone RHOH1_8_B12_A002 5', mRNA sequence /clone=RHOH1_8_B12_A002 /clone_end=5' /gb=CN125046 /gi=45949087
Sbi.14555
RHOH1_43_E04.g1_A002 Acid- and alkaline-treated roots Sorghum bicolor cDNA clone RHOH1_43_E04_A002 5', mRNA sequence /clone=RHOH1_43_E04_A002 /clone_end=5' /gb=CN130769 /gi=45959585
Sbi.17110
GABR1_51_F01.g1_A002 GA- or brassinolide-treated seedlings Sorghum bicolor cDNA clone GABR1_51_F01_A002 5', mRNA sequence /clone=GABR1_51_F01_A002 /clone_end=5' /gb=CX620417 /gi=57819204

Domain Architecture

NAM PF02365 GSVIVP00011769001
DomainStartEndBit scoreE-value
NAM15137251.81.7e-72

Sequences