Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00011870001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00011870001
Family
NAC
3D structure (top 5)
1UT7
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

At.12993
Arabidopsis thaliana ANAC034/ANAC035 (Arabidopsis NAC domain containing protein 34, Arabidopsis NAC domain containing protein 35); transcription fa> (ANAC034/ANAC035) mRNA, complete cds /cds=p(1,1245) /gb=NM_126301
At.28710
Arabidopsis thaliana ANAC036 (Arabidopsis NAC domain containing protein 36); transcription factor (ANAC036) mRNA, complete cds /cds=p(1,831) /gb=NM_127259
Hv.30238
HVSMEa0008A15f Hordeum vulgare seedling shoot EST library HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare cDNA clone HVSMEa0008A15f, mRNA sequence /clone=HVSMEa0008A15f /gb=BF625246
Mtr.10336
Medicago truncatula clone MTYFH_FI_FJ_FK1G-G-1 unknown mRNA /cds=p(33,1337) /gb=BT052720
Os.21395
Oryza sativa Japonica Group cDNA clone:002-121-G12, full insert sequence /gb=AK107090
Os.27216
Oryza sativa (japonica cultivar-group) Os05g0418800 (Os05g0418800) mRNA, complete cds /cds=p(1,1254) /gb=NM_001062103
Os.53506
Oryza sativa Japonica Group cDNA clone:J033000B16, full insert sequence /gb=AK073013
Os.58085
Oryza sativa Japonica Group cDNA, clone: J065128D10, full insert sequence /gb=AK287689
Os.75785
CT849603 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa (indica cultivar-group) cDNA clone CONTIG6378, mRNA sequence /clone=CONTIG6378 /gb=CT849603
Pba.1484
WS02518.B21_G24 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02518_G24 3', mRNA sequence /clone=WS02518_G24 /clone_end=3' /gb=CV243285
Pth.12522
UM69TF07.5pR Populus female catkins cDNA library Populus trichocarpa cDNA clone UM69TF07 5', mRNA sequence /clone=UM69TF07 /clone_end=5' /gb=DN501185
Pth.1484
WS02518.B21_G24 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02518_G24 3', mRNA sequence /clone=WS02518_G24 /clone_end=3' /gb=CV243285
Ptp.9239
N036E05 Populus bark cDNA library Populus tremula x Populus tremuloides cDNA 5 prime, mRNA sequence /clone_end=5' /gb=BU815045
Sbi.7555
WOUND1_62_H12.g1_A002 Wounded leaves Sorghum bicolor cDNA clone WOUND1_62_H12_A002 5', mRNA sequence /clone=WOUND1_62_H12_A002 /clone_end=5' /gb=CN149464 /gi=45991179
Vvi.20107
WIN0211.TB24_B17 Cab Sauv flower, leaf and root non-normalized (WIN02) Vitis vinifera cDNA clone WIN0211_B17 3', mRNA sequence /clone=WIN0211_B17 /clone_end=3' /gb=EC926096
Vvi.7216
WIN053.C21_C15 Cab Sauv flower, leaf and root normalized (WIN05) Vitis vinifera cDNA clone WIN053_C15 3', mRNA sequence /clone=WIN053_C15 /clone_end=3' /gb=EC935053

Domain Architecture

NAM PF02365 GSVIVP00011870001
DomainStartEndBit scoreE-value
NAM9138242.69.8e-70

Sequences