Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00013493001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00013493001
Family
SET
3D structure (top 5)
2PB7 2R3A 1ML9 3F9X 2RFI
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

902613 Score: 1

Arabidopsis thaliana

AT2G35160.1 Score: 1

Oryza sativa subsp. japonica

LOC_Os09g19830.1 Score: 1

Populus trichocarpa

264791 Score: 1

Sorghum bicolor

4874383 Score: 1

Zea mays

GRMZM2G001103_P02 Score: 1
GRMZM2G124729_P02 Score: 1
GRMZM2G001103_P01 Score: 0.951
GRMZM2G124729_P01 Score: 0.951

Expression data

Expressed Sequence Tags

At.12724
Arabidopsis thaliana putative SET-domain protein (At2g35160; T4C15.17) mRNA, complete cds /cds=p(198,2582) /gb=AY062735
At.28511
Arabidopsis thaliana putative mammalian MHC III region protein G9a (At2g22740) mRNA, complete cds /cds=p(113,2485) /gb=AY065374
Os.80559
Oryza sativa (japonica cultivar-group) Os08g0400200 (Os08g0400200) mRNA, complete cds /cds=p(1,3879) /gb=NM_001068288

Domain Architecture

YDG_SRA PF02182 GSVIVP00013493001
DomainStartEndBit scoreE-value
YDG_SRA264397234.52.7e-67
Pre-SET421518150.93.8e-42
SET520650163.94.6e-46

Sequences