Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00014196001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00014196001
Family
MYB-related
3D structure (top 5)
2ELK 2DIM 1X41 1GUU 2CU7
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

496330 Score: 1

Arabidopsis thaliana

AT5G61620.1 Score: 1

Expression data

Expressed Sequence Tags

At.23392
Arabidopsis thaliana myb family transcription factor (AT5G47390) mRNA, complete cds /cds=p(212,1309) /gb=NM_124110
At.29361
Arabidopsis thaliana DNA-binding family protein (AT5G56840) mRNA, complete cds /cds=p(97,798) /gb=NM_125067
At.55665
Arabidopsis thaliana myb family transcription factor (AT5G61620) mRNA, complete cds /cds=p(1,954) /gb=NM_125556
Hv.6265
Hordeum vulgare mRNA for MYBSt1 protein /cds=p(1,945) /gb=AJ965496
Mtr.11848
EST1227574 MTY Medicago truncatula cDNA clone MTYB876, mRNA sequence /clone=MTYB876 /gb=DW018613
Mtr.13735
MTYEC89TF JCVI-MT1 Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=EV260876
Mtr.16497
EST1227431 MTY Medicago truncatula cDNA clone MTYB701, mRNA sequence /clone=MTYB701 /gb=DW018470
Os.11458
Oryza sativa Japonica Group clone KCB704E08 myb transcription factor mRNA, complete cds /cds=p(38,1189) /gb=EU837252
Ppa.6379
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_168779) mRNA, complete cds /cds=p(393,1349) /gb=XM_001775204
Pth.10577
Populus trichocarpa clone WS01230_F05 unknown mRNA /cds=p(116,1054) /gb=EF147391
Sbi.10737
ABA1_30_C02.g1_A012 Abscisic acid-treated seedlings Sorghum bicolor cDNA clone ABA1_30_C02_A012 5', mRNA sequence /clone=ABA1_30_C02_A012 /clone_end=5' /gb=CB925970 /gi=30162241
Vvi.1267
VV_PEd0010c02.g1 Vitis vinifera cv. perlette LibD Vitis vinifera cDNA, mRNA sequence /gb=EV239979
Vvi.23289
VV_PEd03f02.g1 Vitis vinifera cv. perlette LibD Vitis vinifera cDNA, mRNA sequence /gb=EV241970

Domain Architecture

Myb_DNA-binding PF00249 GSVIVP00014196001
DomainStartEndBit scoreE-value
Myb_DNA-binding82129583.5e-14

Sequences