Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00014433001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00014433001
Family
C2H2
3D structure (top 5)
3GOY 2PQF 3BLJ
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

476719 Score: 1

Arabidopsis thaliana

AT1G75710.1 Score: 1

Carica papaya

evm.TU.supercontig_26.34 Score: 1

Oryza sativa subsp. japonica

LOC_Os04g02510.1 Score: 1

Expression data

Expressed Sequence Tags

At.47595
Arabidopsis thaliana At1g75710 mRNA for unknown protein, complete cds, clone: RAFL19-36-L14 /cds=p(84,806) /gb=AK118103
At.68658
Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL16-20-B08 /cds=p(163,1422) /gb=AK228879
Hv.27480
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf100a05, mRNA sequence /gb=AK250862
Mtr.3816
MTYDR62TF JCVI-MT1 Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=EV259061
Os.257
Oryza sativa Japonica Group cDNA clone:001-203-E10, full insert sequence /gb=AK105834
Os.27727
Oryza sativa (japonica cultivar-group) Os04g0115500 (Os04g0115500) mRNA, complete cds /cds=p(1,1443) /gb=NM_001058577
Os.37921
Oryza sativa Japonica Group cDNA clone:J023079O17, full insert sequence /cds=p(181,1638) /gb=AK071014
Os.57118
Oryza sativa Japonica Group cDNA clone:002-173-H08, full insert sequence /gb=AK110948
Os.80857
Oryza sativa Japonica Group cDNA clone:J013110K19, full insert sequence /gb=AK099856
Pth.11936
WS02514.B21.1_H23 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02514_H23 3', mRNA sequence /clone=WS02514_H23 /clone_end=3' /gb=CV242230
Ptp.895
C080P50.3pR Populus strain T89 leaves Populus tremula x Populus tremuloides cDNA clone C080P50 3', mRNA sequence /clone=C080P50 /clone_end=3' /gb=CK090261
Vvi.16007
WIN1122.C21_G21 Muscat Hamburg pre-veraison berry normalized (WIN11) Vitis vinifera cDNA clone WIN1122_G21 3', mRNA sequence /clone=WIN1122_G21 /clone_end=3' /gb=EC984613
Vvi.19258
WIN1125.C21_O04 Muscat Hamburg pre-veraison berry normalized (WIN11) Vitis vinifera cDNA clone WIN1125_O04 3', mRNA sequence /clone=WIN1125_O04 /clone_end=3' /gb=EC985799

Domain Architecture

zf-C2H2 PF00096 GSVIVP00014433001
DomainStartEndBit scoreE-value
zf-C2H216618921.40.0036

Sequences