Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00014609001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00014609001
Family
MYB-related
3D structure (top 5)
2CJJ 2CQQ 2CQR
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

Vvi.16116
CAbud0001_IIIF_G10 Vitis vinifera cv. cabernet sauvignon (Clone 8) Bud - CABUD Vitis vinifera cDNA clone CAbud0001_IIIF_G10 5', mRNA sequence /clone=CAbud0001_IIIF_G10 /clone_end=5' /gb=CF510863
Vvi.16660
CAbud0005_IIF_C01 Vitis vinifera cv. cabernet sauvignon (Clone 8) Bud - CABUD Vitis vinifera cDNA clone CAbud0005_IIF_C01 5', mRNA sequence /clone=CAbud0005_IIF_C01 /clone_end=5' /gb=CF514573
Vvi.16833
CAP0004_IR_G04 Vitis vinifera cv. cabernet sauvignon (Clone 8) Petiole - CAP Vitis vinifera cDNA clone CAP0004_IR_G04 3', mRNA sequence /clone=CAP0004_IR_G04 /clone_end=3' /gb=CF516835
Vvi.18629
VVL156C04_701470 CabSau Berry Postveraison Mixed Stages 36-38 (Brix > 15) under water deficit stress Vitis vinifera cDNA clone VVL156C04 5, mRNA sequence /clone=VVL156C04 /clone_end=5' /gb=DV224061
Vvi.20891
WIN0572.C21_J09 Cab Sauv flower, leaf and root normalized (WIN05) Vitis vinifera cDNA clone WIN0572_J09 3', mRNA sequence /clone=WIN0572_J09 /clone_end=3' /gb=EC956058
Vvi.2566
CA12EI201IIbF_H01 Cabernet Sauvignon Leaf - CA12EI Vitis vinifera cDNA clone CA12EI201IIbF_H01 5', mRNA sequence /clone=CA12EI201IIbF_H01 /clone_end=5' /gb=CA814875
Vvi.2759
CSECS175G07_POSu0038 CabSau Berry Postveraison Stage 38 (POSu0038) Vitis vinifera cDNA clone CSECS175G07 3', mRNA sequence /clone=CSECS175G07 /clone_end=3' /gb=DV940098
Vvi.3587
CA23EI03IIIFb_A11 Cabernet Sauvignon Leaf - CA23EI Vitis vinifera cDNA clone CA23EI03IIIFb_A11 5', mRNA sequence /clone=CA23EI03IIIFb_A11 /clone_end=5' /gb=CB339667
Vvi.3877
CA32EN0002_IIaR_E01 Cabernet Sauvignon Leaf - CA32EN Vitis vinifera cDNA clone CA32EN0002_IIaR_E01 3', mRNA sequence /clone=CA32EN0002_IIaR_E01 /clone_end=3' /gb=CB341964
Vvi.4522
CAB2SG0001_IaR_C03 Cabernet Sauvignon Berry - CAB2SG Vitis vinifera cDNA clone CAB2SG0001_IaR_C03 3', mRNA sequence /clone=CAB2SG0001_IaR_C03 /clone_end=3' /gb=CB346394
Vvi.4819
CAB2SG0004_IVaR_B09 Cabernet Sauvignon Berry - CAB2SG Vitis vinifera cDNA clone CAB2SG0004_IVaR_B09 3', mRNA sequence /clone=CAB2SG0004_IVaR_B09 /clone_end=3' /gb=CB348202
Vvi.5353
CA12EI302IIF_D03 Cabernet Sauvignon Leaf - CA12EI Vitis vinifera cDNA clone CA12EI302IIF_D03 5', mRNA sequence /clone=CA12EI302IIF_D03 /clone_end=5' /gb=CA816115
Vvi.6159
CAB20001_IIIa_Ra_E10 Cabernet Sauvignon Flower bloom - CAB2 Vitis vinifera cDNA clone CAB20001_IIIa_Ra_E10 3', mRNA sequence /clone=CAB20001_IIIa_Ra_E10 /clone_end=3' /gb=CF207170
Vvi.6401
CAB70002_IIIaR_D09 Cabernet Sauvignon Berry Post-Veraison - CAB7 Vitis vinifera cDNA clone CAB70002_IIIaR_D09 3', mRNA sequence /clone=CAB70002_IIIaR_D09 /clone_end=3' /gb=CB980222

Domain Architecture

Myb_DNA-binding PF00249 GSVIVP00014609001
DomainStartEndBit scoreE-value
Myb_DNA-binding55437.45.8e-08

Sequences