Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00014836001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00014836001
Family
HSF
3D structure (top 5)
1HKS 3HTS
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

473862 Score: 1

Arabidopsis thaliana

AT1G46264.1 Score: 1

Vitis vinifera

GSVIVP00014836001 Score: 1
GSVIVP00017248001 Score: 1

Oryza sativa subsp. japonica

LOC_Os07g44690.1 Score: 1

Physcomitrella patens

130937 Score: 1

Populus trichocarpa

287051 Score: 1

Sorghum bicolor

4966952 Score: 1
5034734 Score: 1

Vitis vinifera

GSVIVP00014836001 Score: 1
GSVIVP00017248001 Score: 1

Selaginella moellendorffii

92634 Score: 1

Expression data

Expressed Sequence Tags

At.49954
Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB79ZF11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) /gb=BX814533
Os.50643
Oryza sativa Japonica Group cDNA clone:001-123-F07, full insert sequence /cds=p(96,1028) /gb=AK063952
Os.68844
73289rsicem_6705.y1 Oryza sativa cv. PA64s panicle ferile cDNA library Oryza sativa (indica cultivar-group) cDNA 5', mRNA sequence /clone_end=5' /gb=CK067449
Pba.10851
WS01226.BR_I21 PT-GT-FL-A-3 Populus trichocarpa cDNA clone WS01226_I21 5', mRNA sequence /clone=WS01226_I21 /clone_end=5' /gb=DT472578
Pth.367
Populus trichocarpa clone WS0125_K14 unknown mRNA /cds=p(145,1251) /gb=EF147879
Vvi.22274
WIN0514.C21_A10 Cab Sauv flower, leaf and root normalized (WIN05) Vitis vinifera cDNA clone WIN0514_A10 3', mRNA sequence /clone=WIN0514_A10 /clone_end=3' /gb=EC936954

Domain Architecture

HSF_DNA-bind PF00447 GSVIVP00014836001
DomainStartEndBit scoreE-value
HSF_DNA-bind22241168.71.8e-47

Sequences