Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00015331001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00015331001
Family
C2H2
3D structure (top 5)
3GOY 2PQF 3BLJ 2RF5 1EFY
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Carica papaya

evm.TU.supercontig_36.12 Score: 1

Oryza sativa subsp. japonica

LOC_Os04g59380.1 Score: 1

Physcomitrella patens

197420 Score: 1

Populus trichocarpa

410487 Score: 1

Sorghum bicolor

5058201 Score: 1

Zea mays

GRMZM2G136494_P01 Score: 1

Expression data

Expressed Sequence Tags

At.47595
Arabidopsis thaliana At1g75710 mRNA for unknown protein, complete cds, clone: RAFL19-36-L14 /cds=p(84,806) /gb=AK118103
Hv.27480
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf100a05, mRNA sequence /gb=AK250862
Os.257
Oryza sativa Japonica Group cDNA clone:001-203-E10, full insert sequence /gb=AK105834
Os.27727
Oryza sativa (japonica cultivar-group) Os04g0115500 (Os04g0115500) mRNA, complete cds /cds=p(1,1443) /gb=NM_001058577
Os.37921
Oryza sativa Japonica Group cDNA clone:J023079O17, full insert sequence /cds=p(181,1638) /gb=AK071014
Os.57118
Oryza sativa Japonica Group cDNA clone:002-173-H08, full insert sequence /gb=AK110948
Os.80857
Oryza sativa Japonica Group cDNA clone:J013110K19, full insert sequence /gb=AK099856
Vvi.16007
WIN1122.C21_G21 Muscat Hamburg pre-veraison berry normalized (WIN11) Vitis vinifera cDNA clone WIN1122_G21 3', mRNA sequence /clone=WIN1122_G21 /clone_end=3' /gb=EC984613
Vvi.19258
WIN1125.C21_O04 Muscat Hamburg pre-veraison berry normalized (WIN11) Vitis vinifera cDNA clone WIN1125_O04 3', mRNA sequence /clone=WIN1125_O04 /clone_end=3' /gb=EC985799

Domain Architecture

zf-C2H2 PF00096 GSVIVP00015331001
DomainStartEndBit scoreE-value
zf-C2H2185208230.0012

Sequences