Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00015755001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00015755001
Family
PLATZ

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

881574 Score: 1

Arabidopsis thaliana

AT1G32700.1 Score: 1

Carica papaya

evm.TU.supercontig_43.95 Score: 1

Oryza sativa subsp. japonica

LOC_Os04g50120.1 Score: 1

Physcomitrella patens

111107 Score: 1

Populus trichocarpa

554021 Score: 1

Sorghum bicolor

4762078 Score: 1

Selaginella moellendorffii

69065 Score: 1

Zea mays

GRMZM2G131280_P01 Score: 1

Expression data

Expressed Sequence Tags

At.16977
Arabidopsis thaliana mRNA for putative terpene synthase, complete cds, clone: RAFL14-19-L18 /cds=p(159,1142) /gb=AK227599
At.2047
Arabidopsis thaliana zinc-binding family protein (AT4G17900) mRNA, complete cds /cds=p(177,860) /gb=NM_117900
Hv.2565
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf110d04, mRNA sequence /gb=AK251313
Hv.9148
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf180j17, mRNA sequence /gb=AK252895
Mtr.13224
EST608861 GLSD Medicago truncatula cDNA clone pGLSD-31N5, mRNA sequence /clone=pGLSD-31N5 /gb=BQ123285
Mtr.14791
METB573TF JCVI-MT3 Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=EY477695
Mtr.8325
Medicago truncatula clone MTYF5_F6_F7_F81G-L-13 unknown mRNA /cds=p(144,866) /gb=BT051885
Os.14686
Oryza sativa Japonica Group cDNA clone:J023008F14, full insert sequence /cds=p(235,984) /gb=AK069139
Os.18638
Oryza sativa Japonica Group cDNA clone:J013092A21, full insert sequence /cds=p(94,867) /gb=AK066953
Pba.6454
WS02543.B21_C08 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02543_C08 3', mRNA sequence /clone=WS02543_C08 /clone_end=3' /gb=DT489773
Pba.7723
WS02525.B21_P15 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02525_P15 3', mRNA sequence /clone=WS02525_P15 /clone_end=3' /gb=DT484635
Pba.880
WS02520.B21_M16 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02520_M16 3', mRNA sequence /clone=WS02520_M16 /clone_end=3' /gb=DT482790
Pth.6454
WS02543.B21_C08 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02543_C08 3', mRNA sequence /clone=WS02543_C08 /clone_end=3' /gb=DT489773
Ptp.1985
A060P77.3pR Hybrid aspen plasmid library Populus tremula x Populus tremuloides cDNA clone A060P77 3', mRNA sequence /clone=A060P77 /clone_end=3' /gb=CK088584
Ptp.6002
N068G12 Populus bark cDNA library Populus tremula x Populus tremuloides cDNA clone N068G12 5', mRNA sequence /clone=N068G12 /clone_end=5' /gb=CK110608
Sbi.1612
HS1_1_E11.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone HS1_1_E11_A012 5', mRNA sequence /clone=HS1_1_E11_A012 /clone_end=5' /gb=CD203724 /gi=30932042
Sbi.18732
ANR1_1_C01.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone ANR1_1_C01_A002 5', mRNA sequence /clone=ANR1_1_C01_A002 /clone_end=5' /gb=CX606173 /gi=57803404
Vvi.17357
WIN1032.C21_H17 Muscat Hamburg post-veraison pericarp normalized (WIN10) Vitis vinifera cDNA clone WIN1032_H17 3', mRNA sequence /clone=WIN1032_H17 /clone_end=3' /gb=EC976767
Vvi.7142
WIN0810.C21_F20 Cab Sauv seed normalized (WIN08) Vitis vinifera cDNA clone WIN0810_F20 3', mRNA sequence /clone=WIN0810_F20 /clone_end=3' /gb=EC961020
Vvi.9436
S1G02844 Fruits and flowers treated with GA3 (VvS1) Vitis vinifera cDNA clone S1G02844, mRNA sequence /clone=S1G02844 /gb=EE077015

Domain Architecture

PLATZ PF04640 GSVIVP00015755001
DomainStartEndBit scoreE-value
PLATZ199234.13.4e-67

Sequences