Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00015787001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00015787001
Family
NAC
3D structure (top 5)
1UT7
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

858896 Score: 1

Arabidopsis thaliana

AT4G17980.1 Score: 1

Carica papaya

evm.TU.supercontig_90.41 Score: 1

Expression data

Expressed Sequence Tags

At.32955
Arabidopsis thaliana ANAC071 (Arabidopsis NAC domain containing protein 71); transcription factor (ANAC071) mRNA, complete cds /cds=p(1,789) /gb=NM_117908
At.37235
Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL23-20-J17 /cds=p(64,969) /gb=AK176278
At.41017
Arabidopsis thaliana ANAC045 (Arabidopsis NAC domain containing protein 45); transcription factor (ANAC045) mRNA, complete cds /cds=p(1,1440) /gb=NM_111190
At.50709
Arabidopsis thaliana ANAC086 (Arabidopsis NAC domain containing protein 86); transcription factor (ANAC086) mRNA, complete cds /cds=p(1,1431) /gb=NM_121732
At.51256
Arabidopsis thaliana ANAC096 (Arabidopsis NAC domain containing protein 96); transcription factor (ANAC096) mRNA, complete cds /cds=p(355,1233) /gb=NM_124029
At.51883
95-L022148-065-007-G12-SeLB MPIZ-ADIS-065d Arabidopsis thaliana cDNA clone 007-G12, mRNA sequence /clone=007-G12 /gb=DR749752
At.53361
87-L022147-065-007-G11-SeLA MPIZ-ADIS-065d Arabidopsis thaliana cDNA clone 007-G11, mRNA sequence /clone=007-G11 /gb=DR749828
Hv.27177
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf127o16, mRNA sequence /gb=AK251493
Mtr.12198
EST611135 KVKC Medicago truncatula cDNA clone pKVKC-7D7, mRNA sequence /clone=pKVKC-7D7 /gb=BQ165266
Os.13570
NEW_RNG33-F03-T7 Rice mixture of leaf, root, panicle Oryza sativa (japonica cultivar-group) cDNA, mRNA sequence /gb=EE590715
Os.21932
Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI241J15, full insert sequence /gb=CT833247
Os.83155
Oryza sativa Japonica Group RIM1 mRNA for NAC protein, complete cds /cds=p(1,1953) /gb=AB265821
Vvi.18032
EST 18153 Ripe Grape Skin Triplex2 Library Vitis vinifera cDNA clone B3CS00RL009E05 3', mRNA sequence /clone=B3CS00RL009E05 /clone_end=3' /gb=CN546201
Vvi.514
WIN0814.C21_N11 Cab Sauv seed normalized (WIN08) Vitis vinifera cDNA clone WIN0814_N11 3', mRNA sequence /clone=WIN0814_N11 /clone_end=3' /gb=EC962563

Domain Architecture

NAM PF02365 GSVIVP00015787001
DomainStartEndBit scoreE-value
NAM79190231.42.2e-66

Sequences