Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00015818001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00015818001
Family
MYB-related
3D structure (top 5)
3EVU 2BL0 2OVK 1WDC 2JNF
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

At.25208
Arabidopsis thaliana myb family transcription factor (AT5G45420) mRNA, complete cds /cds=p(10,939) /gb=NM_123910
Mtr.16435
EST639938 MTUS Medicago truncatula cDNA clone MTUS-50H10, mRNA sequence /clone=MTUS-50H10 /gb=CA922220
Os.11238
Oryza sativa Japonica Group cDNA clone:J033051J11, full insert sequence /cds=p(75,1052) /gb=AK073617
Pth.14747
WS02514.B21.1_L05 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02514_L05 3', mRNA sequence /clone=WS02514_L05 /clone_end=3' /gb=CV242304
Vvi.19290
WIN0414.C21_C08 Cab Sauv pericarp normalized (WIN04) Vitis vinifera cDNA clone WIN0414_C08 3', mRNA sequence /clone=WIN0414_C08 /clone_end=3' /gb=EC931690
Vvi.5825
CAB30004_Ia_Ra_D07 Cabernet Sauvignon Berry Stage I - CAB3 Vitis vinifera cDNA clone CAB30004_Ia_Ra_D07 3', mRNA sequence /clone=CAB30004_Ia_Ra_D07 /clone_end=3' /gb=CB974430

Domain Architecture

efhand PF00036 GSVIVP00015818001
DomainStartEndBit scoreE-value
efhand669423.10.0012
efhand22625423.10.0012
Myb_DNA-binding39544429.51.4e-05

Sequences