Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00015867001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00015867001
Family
SNF2
3D structure (top 5)
1Z3I 1Z5Z 1Z63 1WP9 3DMQ
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

342596 Score: 1

Arabidopsis thaliana

AT3G24340.1 Score: 1

Carica papaya

evm.TU.supercontig_76.1 Score: 1

Physcomitrella patens

140579 Score: 1

Populus trichocarpa

286483 Score: 1

Sorghum bicolor

4816526 Score: 1

Expression data

Expressed Sequence Tags

At.37544
Arabidopsis thaliana CHR40 (chromatin remodeling 40); ATP binding / DNA binding / helicase (CHR40) mRNA, complete cds /cds=p(1,3399) /gb=NM_113341
At.42396
Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL05-16-H20 /cds=p(175,4407) /gb=AK226351

Domain Architecture

MuDR PF03108 GSVIVP00015867001
DomainStartEndBit scoreE-value
MuDR441072.90.0012
SNF2_N15051252.71.4e-12
Helicase_C53161068.52.5e-17

Sequences