Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00016169001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00016169001
Family
E2F-DP
3D structure (top 5)
1CF7
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

485177 Score: 1

Arabidopsis thaliana

AT3G48160.2 Score: 1

Carica papaya

evm.TU.supercontig_35.31 Score: 1

Physcomitrella patens

231478 Score: 1

Populus trichocarpa

570039 Score: 1

Expression data

Expressed Sequence Tags

At.35736
Arabidopsis thaliana clone RAFL15-19-A14 (R20743) putative DP-E2F protein 1 (At3g48160) mRNA, complete cds /cds=p(311,1522) /gb=BT004258
At.41295
Arabidopsis thaliana DEL3 (DP-E2F-like 3); transcription factor (DEL3) mRNA, complete cds /cds=p(31,1095) /gb=NM_110999
Hv.28959
HDP12L12w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP12L12, mRNA sequence /clone=HDP12L12 /gb=EX590291
Vvi.12819
WIN054.C21_B18 Cab Sauv flower, leaf and root normalized (WIN05) Vitis vinifera cDNA clone WIN054_B18 3', mRNA sequence /clone=WIN054_B18 /clone_end=3' /gb=EC935367

Domain Architecture

E2F_TDP PF02319 GSVIVP00016169001
DomainStartEndBit scoreE-value
E2F_TDP2085109.61e-29
E2F_TDP163243121.72.4e-33

Sequences