Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00016181001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00016181001
Family
MYB-related
3D structure (top 5)
1IRZ 2ELK 2CU7 2CRG 2ROH
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Carica papaya

evm.TU.supercontig_35.9 Score: 1

Expression data

Expressed Sequence Tags

At.23392
Arabidopsis thaliana myb family transcription factor (AT5G47390) mRNA, complete cds /cds=p(212,1309) /gb=NM_124110
At.35354
Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL14-29-L19 /cds=p(63,848) /gb=AK227711
Mtr.13735
MTYEC89TF JCVI-MT1 Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=EV260876
Mtr.14074
EST1226559 MTY Medicago truncatula cDNA clone MTYAV63, mRNA sequence /clone=MTYAV63 /gb=DW017598
Mtr.16497
EST1227431 MTY Medicago truncatula cDNA clone MTYB701, mRNA sequence /clone=MTYB701 /gb=DW018470
Mtr.4350
EST641894 GPOD Medicago truncatula cDNA clone GPOD-37K19, mRNA sequence /clone=GPOD-37K19 /gb=CA917747
Pba.9082
WS02523.B21_M02 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02523_M02 3', mRNA sequence /clone=WS02523_M02 /clone_end=3' /gb=DT483853
Pth.10577
Populus trichocarpa clone WS01230_F05 unknown mRNA /cds=p(116,1054) /gb=EF147391
Pth.9082
WS02523.B21_M02 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02523_M02 3', mRNA sequence /clone=WS02523_M02 /clone_end=3' /gb=DT483853
Ptp.11924
R043B08 Populus root cDNA library Populus tremula x Populus tremuloides cDNA 5 prime, mRNA sequence /clone_end=5' /gb=BU886273
Vvi.1267
VV_PEd0010c02.g1 Vitis vinifera cv. perlette LibD Vitis vinifera cDNA, mRNA sequence /gb=EV239979
Vvi.7435
WIN061.C21_H14 Cab Sauv seed normalized (WIN06) Vitis vinifera cDNA clone WIN061_H14 3', mRNA sequence /clone=WIN061_H14 /clone_end=3' /gb=EC957023

Domain Architecture

Myb_DNA-binding PF00249 GSVIVP00016181001
DomainStartEndBit scoreE-value
Myb_DNA-binding9514250.85.1e-12

Sequences