Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00016527001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00016527001
Family
MYB-related
3D structure (top 5)
1HST 1UHM 1USS 1UST 1GHC
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis thaliana

AT1G72740.2 Score: 1
AT1G72740.1 Score: 0.986

Carica papaya

evm.TU.supercontig_25.83 Score: 1

Oryza sativa subsp. japonica

LOC_Os01g51154.1 Score: 1
LOC_Os01g51154.2 Score: 0.967

Populus trichocarpa

582938 Score: 1

Zea mays

GRMZM2G023667_P01 Score: 1

Expression data

Expressed Sequence Tags

At.41830
Arabidopsis thaliana DNA-binding protein, putative (AT1G17520) mRNA, complete cds /cds=p(162,1052) /gb=NM_101614
Hv.11350
HVSMEh0099B10f Hordeum vulgare 5-45 DAP spike EST library HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare cDNA clone HVSMEh0099B10f, mRNA sequence /clone=HVSMEh0099B10f /gb=BE602473
Sbi.6224
HS1_20_E11.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone HS1_20_E11_A012 5', mRNA sequence /clone=HS1_20_E11_A012 /clone_end=5' /gb=CD206135 /gi=30936908
Vvi.11782
WIN0560.C21_N04 Cab Sauv flower, leaf and root normalized (WIN05) Vitis vinifera cDNA clone WIN0560_N04 3', mRNA sequence /clone=WIN0560_N04 /clone_end=3' /gb=EC954145

Domain Architecture

Myb_DNA-binding PF00249 GSVIVP00016527001
DomainStartEndBit scoreE-value
Myb_DNA-binding55734.25.1e-07
Linker_histone11918730.47.6e-07

Sequences