Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00016537001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00016537001
Family
HSF
3D structure (top 5)
1HKS 3HTS
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Carica papaya

evm.TU.supercontig_28.133 Score: 1

Expression data

Expressed Sequence Tags

At.28558
Arabidopsis thaliana unknown protein (At5g54070) mRNA, complete cds /cds=p(35,1030) /gb=AY065226
At.5364
Arabidopsis thaliana HSF3 (HEAT SHOCK FACTOR 3); DNA binding / transcription factor (HSF3) mRNA, complete cds /cds=p(117,1562) /gb=NM_180501
At.6312
Arabidopsis thaliana putative heat shock protein (At3g22830) mRNA, complete cds /cds=p(162,1382) /gb=AY045974
Os.18587
Oryza sativa Japonica Group cDNA clone:J033067M16, full insert sequence /gb=AK101824
Os.51916
Oryza sativa Japonica Group cDNA clone:002-105-E08, full insert sequence /gb=AK064271
Os.9717
Oryza sativa Japonica Group cDNA clone:J023088F14, full insert sequence /cds=p(126,1646) /gb=AK100430
Pba.6450
WS02543.B21_C13 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02543_C13 3', mRNA sequence /clone=WS02543_C13 /clone_end=3' /gb=DT489777
Pth.6450
WS02543.B21_C13 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02543_C13 3', mRNA sequence /clone=WS02543_C13 /clone_end=3' /gb=DT489777
Vvi.24263
VVB181A04_414523 An expressed sequence tag database for abiotic stressed leaves of Vitis vinifera var. Chardonnay Vitis vinifera cDNA clone VVB181A04 5, mRNA sequence /clone=VVB181A04 /clone_end=5' /gb=CD721308

Domain Architecture

HSF_DNA-bind PF00447 GSVIVP00016537001
DomainStartEndBit scoreE-value
HSF_DNA-bind68233210.74e-60

Sequences