Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00016555001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00016555001
Family
C3H
3D structure (top 5)
2OIK 2EO4 1FIT 1KPF 1XQU
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis thaliana

AT5G56900.2 Score: 1.031
AT5G56900.1 Score: 1

Zea mays

GRMZM2G006611_P01 Score: 1.031
GRMZM2G006611_P02 Score: 1

Expression data

Expressed Sequence Tags

At.29358
Arabidopsis thaliana At5g56900 mRNA sequence /gb=AY080699
Hv.20202
BES1824107f02 BES1824 Hordeum vulgare subsp. vulgare cDNA clone MPMGp2010F027 5-PRIME, mRNA sequence /clone=MPMGp2010F02107 /clone_end=5' /gb=CK124179
Mtr.9639
EST670069 MTUS Medicago truncatula cDNA clone MTUS-19C8, mRNA sequence /clone=MTUS-19C8 /gb=CF069348
Os.49315
Oryza sativa Japonica Group cDNA clone:J033043A02, full insert sequence /gb=AK111875
Vvi.1609
CAB40004_IVa_Fa_G09 Cabernet Sauvignon Berry - CAB4 Vitis vinifera cDNA clone CAB40004_IVa_Fa_G09 5', mRNA sequence /clone=CAB40004_IVa_Fa_G09 /clone_end=5' /gb=CB977715

Domain Architecture

zf-CCCH PF00642 GSVIVP00016555001
DomainStartEndBit scoreE-value
zf-CCCH22610.60.06
CwfJ_C_136159150.16.6e-42
CwfJ_C_21682631313.8e-36

Sequences