Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00016857001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00016857001
Family
C3H
3D structure (top 5)
1M9O 2E5S 2RPP 3D2Q 3D2N
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

479452 Score: 1

Arabidopsis thaliana

AT3G19360.1 Score: 1

Carica papaya

evm.TU.supercontig_75.53 Score: 1

Populus trichocarpa

557115 Score: 1

Expression data

Expressed Sequence Tags

Pba.1354
WS0253.B21_H24 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS0253_H24 3', mRNA sequence /clone=WS0253_H24 /clone_end=3' /gb=CV244018
Pth.1354
WS0253.B21_H24 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS0253_H24 3', mRNA sequence /clone=WS0253_H24 /clone_end=3' /gb=CV244018
Vvi.22905
WIN106.C21_B12 Muscat Hamburg post-veraison pericarp normalized (WIN10) Vitis vinifera cDNA clone WIN106_B12 3', mRNA sequence /clone=WIN106_B12 /clone_end=3' /gb=EC977900
Vvi.24246
sT7aVVM027M23084 VVM Vitis vinifera cDNA clone VVM027M23084 5' similar to emb_CAO65630.1 unnamed protein product [Vitis vinifera]. Expect = 5e-66, mRNA sequence /clone=VVM027M23084 /clone_end=5' /gb=FC070459

Domain Architecture

zf-CCCH PF00642 GSVIVP00016857001
DomainStartEndBit scoreE-value
zf-CCCH8711236.31.2e-07
zf-CCCH14817430.95.2e-06
zf-CCCH21123746.51e-10

Sequences