Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00017977001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00017977001
Family
MYB-related
3D structure (top 5)
2FQ3 2DCE 2COM 2ELK 2YUS
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

904238 Score: 1

Arabidopsis thaliana

AT2G47620.1 Score: 1

Chlorella sp. NC64A

134832 Score: 1

Oryza sativa subsp. japonica

LOC_Os04g40420.1 Score: 1

Physcomitrella patens

166589 Score: 1

Populus trichocarpa

575397 Score: 1

Sorghum bicolor

4761213 Score: 1

Selaginella moellendorffii

442222 Score: 1

Zea mays

GRMZM2G126322_P01 Score: 1
GRMZM2G135410_P01 Score: 1

Expression data

Expressed Sequence Tags

At.27229
Arabidopsis thaliana ATSWI3A (Arabidopsis thaliana switching protein 3A); DNA binding (ATSWI3A) mRNA, complete cds /cds=p(88,1626) /gb=NM_180145
Mtr.9417
EST485671 GVN Medicago truncatula cDNA clone pGVN-74N8 5' end, mRNA sequence /clone=pGVN-74N8 /clone_end=5' /gb=BG583911

Domain Architecture

SWIRM PF04433 GSVIVP00017977001
DomainStartEndBit scoreE-value
SWIRM22110108.71.9e-29
Myb_DNA-binding24529025.10.0003

Sequences

protein sequence
transcript sequence