Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00018103001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00018103001
Family
NAC
3D structure (top 5)
1UT7
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

908325 Score: 1

Arabidopsis thaliana

AT5G04410.1 Score: 1

Oryza sativa subsp. japonica

LOC_Os08g44820.1 Score: 1

Populus trichocarpa

228193 Score: 1

Sorghum bicolor

144914 Score: 1

Zea mays

GRMZM2G125777_P01 Score: 1

Expression data

Expressed Sequence Tags

At.11394
Arabidopsis thaliana ANAC017 (Arabidopsis NAC domain containing protein 17); transcription factor (ANAC017) mRNA, complete cds /cds=p(279,1952) /gb=NM_103142
At.20114
Arabidopsis thaliana ANAC050; transcription factor (ANAC050) mRNA, complete cds /cds=p(63,1406) /gb=NM_111883
At.20993
Arabidopsis thaliana ANAC051/ANAC052 (Arabidopsis NAC domain containing protein 51, Arabidopsis NAC domain containing protein 52); transcription fa> (ANAC051/ANAC052) mRNA, complete cds /cds=p(163,1518) /gb=NM_180223
At.48014
Arabidopsis thaliana ANAC082 (Arabidopsis NAC domain containing protein 82) (ANAC082) mRNA, complete cds /cds=p(470,1939) /gb=NM_001085082
Hv.23644
Hordeum vulgare subsp. vulgare mRNA for transcription factor, complete cds /cds=p(11,1306) /gb=AB362161
Hv.5295
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf28m08, mRNA sequence /gb=AK249396
Mtr.11148
EST590393 KV2 Medicago truncatula cDNA clone pKV2-53K1, mRNA sequence /clone=pKV2-53K1 /gb=BM779817
Mtr.13512
EST646405 HOGA Medicago truncatula cDNA clone HOGA-28O22, mRNA sequence /clone=HOGA-28O22 /gb=CB893613
Mtr.6492
Medicago truncatula NAC1 (NAC1) mRNA, complete cds /cds=p(186,1415) /gb=AF254124
Os.12020
Oryza sativa Japonica Group cDNA clone:J013032G17, full insert sequence /cds=p(759,2108) /gb=AK099540
Os.93257
Oryza sativa Japonica Group cDNA clone:J013131L02, full insert sequence /gb=AK068153
Os.9354
Oryza sativa Japonica Group cDNA clone:J023008J18, full insert sequence /cds=p(84,2054) /gb=AK120773
Pba.3225
WS01124.BR_C05 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS01124_C05 5', mRNA sequence /clone=WS01124_C05 /clone_end=5' /gb=DT496679
Pth.3225
Populus trichocarpa clone WS01124_C05 unknown mRNA /cds=p(82,1404) /gb=EF145394
Sbi.17975
OX1_38_A01.g1_A002 Oxidatively-stressed leaves and roots Sorghum bicolor cDNA clone OX1_38_A01_A002 5', mRNA sequence /clone=OX1_38_A01_A002 /clone_end=5' /gb=CN135689 /gi=45968055
Vvi.11133
SCB06674 Inflorescence with GA3 (VvS12) Vitis vinifera cDNA clone SCB06674, mRNA sequence /clone=SCB06674 /gb=EE108760
Vvi.3307
VV_PEa09a02.g1 Vitis vinifera cv. perlette LibA Vitis vinifera cDNA, mRNA sequence /gb=EV229979

Domain Architecture

NAM PF02365 GSVIVP00018103001
DomainStartEndBit scoreE-value
NAM9137268.51.5e-77

Sequences