Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00018104001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00018104001
Family
NAC
3D structure (top 5)
1UT7
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

478382 Score: 1

Arabidopsis thaliana

AT3G10480.1 Score: 1
AT3G10480.2 Score: 1

Populus trichocarpa

228184 Score: 1

Expression data

Expressed Sequence Tags

At.20993
Arabidopsis thaliana ANAC051/ANAC052 (Arabidopsis NAC domain containing protein 51, Arabidopsis NAC domain containing protein 52); transcription fa> (ANAC051/ANAC052) mRNA, complete cds /cds=p(163,1518) /gb=NM_180223
At.21933
Arabidopsis thaliana ANAC053 (Arabidopsis NAC domain containing protein 53); transcription factor (ANAC053) mRNA, complete cds /cds=p(229,1878) /gb=NM_111885
At.22852
Arabidopsis thaliana NAC2 (Arabidopsis NAC domain containing protein 78); transcription factor (NAC2) mRNA, complete cds /cds=p(223,1926) /gb=NM_120523
At.53361
87-L022147-065-007-G11-SeLA MPIZ-ADIS-065d Arabidopsis thaliana cDNA clone 007-G11, mRNA sequence /clone=007-G11 /gb=DR749828
Hv.5295
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf28m08, mRNA sequence /gb=AK249396
Mtr.11148
EST590393 KV2 Medicago truncatula cDNA clone pKV2-53K1, mRNA sequence /clone=pKV2-53K1 /gb=BM779817
Mtr.13512
EST646405 HOGA Medicago truncatula cDNA clone HOGA-28O22, mRNA sequence /clone=HOGA-28O22 /gb=CB893613
Mtr.6492
Medicago truncatula NAC1 (NAC1) mRNA, complete cds /cds=p(186,1415) /gb=AF254124
Os.12020
Oryza sativa Japonica Group cDNA clone:J013032G17, full insert sequence /cds=p(759,2108) /gb=AK099540
Os.83155
Oryza sativa Japonica Group RIM1 mRNA for NAC protein, complete cds /cds=p(1,1953) /gb=AB265821
Os.93257
Oryza sativa Japonica Group cDNA clone:J013131L02, full insert sequence /gb=AK068153
Os.9354
Oryza sativa Japonica Group cDNA clone:J023008J18, full insert sequence /cds=p(84,2054) /gb=AK120773
Pba.3225
WS01124.BR_C05 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS01124_C05 5', mRNA sequence /clone=WS01124_C05 /clone_end=5' /gb=DT496679
Sbi.17975
OX1_38_A01.g1_A002 Oxidatively-stressed leaves and roots Sorghum bicolor cDNA clone OX1_38_A01_A002 5', mRNA sequence /clone=OX1_38_A01_A002 /clone_end=5' /gb=CN135689 /gi=45968055
Vvi.10074
WIN0520.C21_H06 Cab Sauv flower, leaf and root normalized (WIN05) Vitis vinifera cDNA clone WIN0520_H06 3', mRNA sequence /clone=WIN0520_H06 /clone_end=3' /gb=EC940686
Vvi.11133
SCB06674 Inflorescence with GA3 (VvS12) Vitis vinifera cDNA clone SCB06674, mRNA sequence /clone=SCB06674 /gb=EE108760

Domain Architecture

NAM PF02365 GSVIVP00018104001
DomainStartEndBit scoreE-value
NAM13141255.99.8e-74

Sequences