Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00019145001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00019145001
Family
SNF2
3D structure (top 5)
2V1X 2OCA 1Z3I 1Z5Z 2J0S
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

483627 Score: 1

Arabidopsis thaliana

AT2G44980.2 Score: 1

Oryza sativa subsp. japonica

LOC_Os03g01200.1 Score: 1

Physcomitrella patens

108610 Score: 1

Populus trichocarpa

781297 Score: 1

Sorghum bicolor

4872964 Score: 1

Expression data

Expressed Sequence Tags

At.47803
Arabidopsis thaliana transcription regulatory protein SNF2, putative (AT2G44980) mRNA, complete cds /cds=p(1,2634) /gb=NM_201960
Os.7306
Oryza sativa (japonica cultivar-group) clone C12105 SNF2P (Snf2P) precursor RNA, complete cds /gb=AF459087
Ppa.13979
Physcomitrella patens subsp. patens SNF2 family DNA-dependent ATPase (CHR1525) mRNA, complete cds /cds=p(1,2427) /gb=XM_001780974

Domain Architecture

SNF2_N PF00176 GSVIVP00019145001
DomainStartEndBit scoreE-value
SNF2_N40336269.57.5e-78
Helicase_C39048072.31.7e-18

Sequences