Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00019488001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00019488001
Family
HSF
3D structure (top 5)
1HKS 3HTS
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

490909 Score: 1

Arabidopsis thaliana

AT4G36990.1 Score: 1

Carica papaya

evm.TU.supercontig_55.149 Score: 1

Oryza sativa subsp. japonica

LOC_Os09g28354.1 Score: 1

Populus trichocarpa

218690 Score: 1

Sorghum bicolor

5051282 Score: 1

Zea mays

GRMZM2G139535_P01 Score: 1

Expression data

Expressed Sequence Tags

At.5365
Arabidopsis thaliana HSF4 (HEAT SHOCK FACTOR 4); DNA binding / transcription factor (HSF4) mRNA, complete cds /cds=p(484,1338) /gb=NM_119862
Mtr.13459
Medicago truncatula clone MTYFH_FI_FJ_FK1G-P-2 unknown mRNA /cds=m(83,829) /gb=BT052747
Vvi.7306
WIN1028.C21_E01 Muscat Hamburg post-veraison pericarp normalized (WIN10) Vitis vinifera cDNA clone WIN1028_E01 3', mRNA sequence /clone=WIN1028_E01 /clone_end=3' /gb=EC975464

Domain Architecture

HSF_DNA-bind PF00447 GSVIVP00019488001
DomainStartEndBit scoreE-value
HSF_DNA-bind10205164.14e-46

Sequences