Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00020373001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00020373001
Family
SET
3D structure (top 5)
2PB7 2R3A 1ML9 3F9X 2RFI
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

332974 Score: 1

Arabidopsis thaliana

AT2G33290.1 Score: 1

Oryza sativa subsp. japonica

LOC_Os07g25450.1 Score: 1

Populus trichocarpa

229952 Score: 1

Sorghum bicolor

4789504 Score: 1

Zea mays

GRMZM2G025924_P01 Score: 1
GRMZM2G112145_P01 Score: 1

Expression data

Expressed Sequence Tags

At.12115
Arabidopsis thaliana SUVH2 (SU(VAR)3-9 HOMOLOG 2) (SUVH2) mRNA, complete cds /cds=p(115,2070) /gb=NM_128889
At.3118
Arabidopsis thaliana SUVH9 (SU(VAR)3-9 HOMOLOG 9); histone-lysine N-methyltransferase/ zinc ion binding (SUVH9) mRNA, complete cds /cds=p(400,2352) /gb=NM_001036548
Os.26478
Oryza sativa Japonica Group cDNA clone:J013097K17, full insert sequence /cds=p(299,2353) /gb=AK067172

Domain Architecture

YDG_SRA PF02182 GSVIVP00020373001
DomainStartEndBit scoreE-value
YDG_SRA225380302.68.3e-88
Pre-SET410508123.47.2e-34
SET510665120.55.5e-33

Sequences