Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00020648001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00020648001
Family
NAC
3D structure (top 5)
1UT7
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis thaliana

AT3G01600.1 Score: 1

Oryza sativa subsp. japonica

LOC_Os02g38130.1 Score: 1

Sorghum bicolor

4979165 Score: 1

Zea mays

GRMZM2G104078_P02 Score: 1

Expression data

Expressed Sequence Tags

At.31945
Arabidopsis thaliana ANAC075 (Arabidopsis NAC domain containing protein 75); transcription factor (ANAC075) mRNA, complete cds /cds=p(1,1497) /gb=NM_119067
At.54535
Arabidopsis thaliana ANAC073 (Arabidopsis NAC domain containing protein 73); transcription factor (ANAC073) mRNA, complete cds /cds=p(355,1272) /gb=NM_118992
At.55590
Arabidopsis thaliana ANAC099 (Arabidopsis NAC domain containing protein 99); transcription factor (ANAC099) mRNA, complete cds /cds=p(1,1161) /gb=NM_125045
Hv.4641
HVSMEn0023A06f Hordeum vulgare rachis EST library HVcDNA0015 (normal) Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0023A06f, mRNA sequence /clone=HVSMEn0023A06f /gb=BI960052
Mtr.15072
EST508298 HOGA Medicago truncatula cDNA clone pHOGA-9B19 5' end, mRNA sequence /clone=pHOGA-9B19 /clone_end=5' /gb=BG646679
Mtr.18950
EST645956 HOGA Medicago truncatula cDNA clone HOGA-27C3, mRNA sequence /clone=HOGA-27C3 /gb=CB893164
Mtr.8224
EST645710 HOGA Medicago truncatula cDNA clone HOGA-26M9, mRNA sequence /clone=HOGA-26M9 /gb=CB892918
Os.50585
Oryza sativa Japonica Group cDNA clone:J033107L05, full insert sequence /cds=p(344,1525) /gb=AK121953
Os.53950
Oryza sativa Japonica Group cDNA clone:J023145A15, full insert sequence /cds=p(332,1276) /gb=AK100983
Os.83391
Oryza sativa Japonica Group cDNA clone:002-138-G10, full insert sequence /cds=p(625,1251) /gb=AK108082
Os.92004
OSIIEb08H04.f OSIIEb Oryza sativa (indica cultivar-group) cDNA clone OSIIEb08H04 5', mRNA sequence /clone=OSIIEb08H04 /clone_end=5' /gb=CB631107
Os.9851
Oryza sativa Japonica Group cDNA clone:J033108B03, full insert sequence /cds=p(184,1185) /gb=AK102794
Ptp.11284
UK128TA05 Populus apical shoot cDNA library Populus tremula x Populus tremuloides cDNA 5 prime, mRNA sequence /clone_end=5' /gb=BU827063
Vvi.2656
CAbud0002_IVR_E02 Vitis vinifera cv. cabernet sauvignon (Clone 8) Bud - CABUD Vitis vinifera cDNA clone CAbud0002_IVR_E02 3', mRNA sequence /clone=CAbud0002_IVR_E02 /clone_end=3' /gb=CF511690

Domain Architecture

NAM PF02365 GSVIVP00020648001
DomainStartEndBit scoreE-value
NAM68211128.81.7e-35

Sequences