Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00020855001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00020855001
Family
E2F-DP
3D structure (top 5)
1CF7
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Oryza sativa subsp. japonica

LOC_Os02g50630.1 Score: 1

Sorghum bicolor

4897135 Score: 1

Selaginella moellendorffii

421405 Score: 1

Zea mays

GRMZM2G024688_P01 Score: 1
GRMZM2G060000_P01 Score: 1
GRMZM2G024688_P02 Score: 0.989
GRMZM2G060000_P02 Score: 0.989

Expression data

Expressed Sequence Tags

At.35736
Arabidopsis thaliana clone RAFL15-19-A14 (R20743) putative DP-E2F protein 1 (At3g48160) mRNA, complete cds /cds=p(311,1522) /gb=BT004258
At.41295
Arabidopsis thaliana DEL3 (DP-E2F-like 3); transcription factor (DEL3) mRNA, complete cds /cds=p(31,1095) /gb=NM_110999
Os.47376
Oryza sativa Japonica Group cDNA clone:J013041C09, full insert sequence /gb=AK111537
Vvi.12819
WIN054.C21_B18 Cab Sauv flower, leaf and root normalized (WIN05) Vitis vinifera cDNA clone WIN054_B18 3', mRNA sequence /clone=WIN054_B18 /clone_end=3' /gb=EC935367

Domain Architecture

E2F_TDP PF02319 GSVIVP00020855001
DomainStartEndBit scoreE-value
E2F_TDP1984109.98.7e-30
E2F_TDP144224113.28.9e-31

Sequences