Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00021274001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00021274001
Family
C3H
3D structure (top 5)
2RPP 3D2Q 2D9N 2E5S 3D2N
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

484140 Score: 1

Arabidopsis thaliana

AT2G02160.1 Score: 1

Oryza sativa subsp. japonica

LOC_Os04g57600.1 Score: 1

Populus trichocarpa

657068 Score: 1

Sorghum bicolor

4985725 Score: 1

Zea mays

GRMZM2G150262_P01 Score: 1

Expression data

Expressed Sequence Tags

Pba.5881
WS02547.C21_H24 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02547_H24 3', mRNA sequence /clone=WS02547_H24 /clone_end=3' /gb=DT491354
Pth.12309
WS02547.C21_H24 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02547_H24 3', mRNA sequence /clone=WS02547_H24 /clone_end=3' /gb=DT491354
Vvi.20759
WIN0548.C21_I03 Cab Sauv flower, leaf and root normalized (WIN05) Vitis vinifera cDNA clone WIN0548_I03 3', mRNA sequence /clone=WIN0548_I03 /clone_end=3' /gb=EC950043

Domain Architecture

zf-CCCH PF00642 GSVIVP00021274001
DomainStartEndBit scoreE-value
zf-CCCH2552130.029
zf-CCCH56808.30.12
zf-CCCH10513028.33e-05

Sequences