Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00021673001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00021673001
Family
HSF
3D structure (top 5)
1HKS 3HTS
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

908246 Score: 1

Oryza sativa subsp. japonica

LOC_Os02g32590.1 Score: 1

Sorghum bicolor

5055189 Score: 1

Zea mays

GRMZM2G059851_P01 Score: 1

Expression data

Expressed Sequence Tags

At.45813
Arabidopsis thaliana AT-HSFA3 (Arabidopsis thaliana heat shock transcription factor A3); DNA binding / transcription factor (AT-HSFA3) mRNA, complete cds /cds=p(1,1239) /gb=NM_120453
Os.18587
Oryza sativa Japonica Group cDNA clone:J033067M16, full insert sequence /gb=AK101824
Pba.6450
WS02543.B21_C13 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02543_C13 3', mRNA sequence /clone=WS02543_C13 /clone_end=3' /gb=DT489777
Pth.6450
WS02543.B21_C13 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02543_C13 3', mRNA sequence /clone=WS02543_C13 /clone_end=3' /gb=DT489777

Domain Architecture

HSF_DNA-bind PF00447 GSVIVP00021673001
DomainStartEndBit scoreE-value
HSF_DNA-bind98265211.71.9e-60

Sequences