Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00023467001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00023467001
Family
MYB-related
3D structure (top 5)
1IRZ 2IW5 2YUM 2CU7 2DIN
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

488595 Score: 1

Arabidopsis thaliana

AT5G17300.1 Score: 1

Carica papaya

evm.TU.supercontig_7.134 Score: 1

Oryza sativa subsp. japonica

LOC_Os04g49450.1 Score: 1

Populus trichocarpa

198884 Score: 1

Sorghum bicolor

5006812 Score: 1

Zea mays

GRMZM2G145041_P01 Score: 1

Expression data

Expressed Sequence Tags

At.53244
Arabidopsis thaliana myb family transcription factor (AT3G10113) mRNA, complete cds /cds=p(1,1011) /gb=NM_148701
Mtr.13346
EST1224897 MTY Medicago truncatula cDNA clone MTYAB39, mRNA sequence /clone=MTYAB39 /gb=DW015936
Pba.1151
WS0256.B21_G08 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS0256_G08 3', mRNA sequence /clone=WS0256_G08 /clone_end=3' /gb=CV245066
Pth.1151
WS0256.B21_G08 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS0256_G08 3', mRNA sequence /clone=WS0256_G08 /clone_end=3' /gb=CV245066
Vvi.10299
VV_PEa21c08.b1 Vitis vinifera cv. perlette LibA Vitis vinifera cDNA, mRNA sequence /gb=EV229193

Domain Architecture

Myb_DNA-binding PF00249 GSVIVP00023467001
DomainStartEndBit scoreE-value
Myb_DNA-binding6911457.55.2e-14

Sequences