Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00024088001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00024088001
Family
C3H
3D structure (top 5)
2VGE 1OY3 3DEO 2FO1 3F6Q
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis thaliana

AT5G58620.1 Score: 1

Carica papaya

evm.TU.supercontig_112.7 Score: 1

Oryza sativa subsp. japonica

LOC_Os05g03760.1 Score: 1

Populus trichocarpa

752023 Score: 1

Zea mays

GRMZM2G054844_P01 Score: 1

Expression data

Expressed Sequence Tags

At.23950
Arabidopsis thaliana zinc finger (CCCH-type) family protein (AT2G41900) mRNA, complete cds /cds=p(317,2467) /gb=NM_129754
Mtr.12130
EST646389 HOGA Medicago truncatula cDNA clone HOGA-28M8, mRNA sequence /clone=HOGA-28M8 /gb=CB893597
Ptp.6284
N036H06 Populus bark cDNA library Populus tremula x Populus tremuloides cDNA 5 prime, mRNA sequence /clone_end=5' /gb=BU815078
Sbi.17965
LG1_292_E12.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA sequence /gb=AW564424
Vvi.19078
VV_PEd01a07.g1 Vitis vinifera cv. perlette LibD Vitis vinifera cDNA, mRNA sequence /gb=EV241477
Vvi.5592
VV_PEd0013h04.g1 Vitis vinifera cv. perlette LibD Vitis vinifera cDNA, mRNA sequence /gb=EV240679

Domain Architecture

Ank PF00023 GSVIVP00024088001
DomainStartEndBit scoreE-value
Ank7210517.90.041
Ank10714229.61.3e-05
zf-CCCH23325823.80.00069

Sequences