Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00024297001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00024297001
Family
MYB-related
3D structure (top 5)
2JUH 2ROH 2AJE 2CKX
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis thaliana

AT1G07540.1 Score: 1

Carica papaya

evm.TU.supercontig_81.134 Score: 1

Populus trichocarpa

203733 Score: 1

Expression data

Expressed Sequence Tags

At.49863
Arabidopsis thaliana TRFL2 (TRF-LIKE 2); DNA binding (TRFL2) mRNA, complete cds /cds=p(1,1893) /gb=NM_100628
Hv.19459
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf96d16, mRNA sequence /gb=AK248575
Mtr.20478
EST638513 MTUS Medicago truncatula cDNA clone MTUS-32D11, mRNA sequence /clone=MTUS-32E2 /gb=CA920795
Mtr.21510
MEUA749TF JCVI-MT2 Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=GE343978
Os.2449
Oryza sativa Japonica Group cDNA clone:J013157F01, full insert sequence /gb=AK068473
Os.80119
Oryza sativa Japonica Group cDNA, clone: J100049F09, full insert sequence /gb=AK243267
Pba.1302
WS0254.B21_C20 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS0254_C20 3', mRNA sequence /clone=WS0254_C20 /clone_end=3' /gb=CV244261
Pba.2697
WS0168.B21_C19 PT-DX-A-7 Populus trichocarpa cDNA clone WS0168_C19 3', mRNA sequence /clone=WS0168_C19 /clone_end=3' /gb=CV227774
Pba.9280
WS02519.B21_D23 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02519_D23 3', mRNA sequence /clone=WS02519_D23 /clone_end=3' /gb=DT482225
Pth.1302
WS0254.B21_C20 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS0254_C20 3', mRNA sequence /clone=WS0254_C20 /clone_end=3' /gb=CV244261
Pth.2697
WS0168.B21_C19 PT-DX-A-7 Populus trichocarpa cDNA clone WS0168_C19 3', mRNA sequence /clone=WS0168_C19 /clone_end=3' /gb=CV227774
Pth.9280
WS02519.B21_D23 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02519_D23 3', mRNA sequence /clone=WS02519_D23 /clone_end=3' /gb=DT482225
Ptp.2171
N070D06 Populus bark cDNA library Populus tremula x Populus tremuloides cDNA 5 prime, mRNA sequence /clone_end=5' /gb=BU816704
Sbi.12193
POL1_58_F09.g1_A002 Pollen Sorghum bicolor cDNA clone POL1_58_F09_A002 5', mRNA sequence /clone=POL1_58_F09_A002 /clone_end=5' /gb=CF489640 /gi=34518509
Vvi.3145
WIN0563.C21_E04 Cab Sauv flower, leaf and root normalized (WIN05) Vitis vinifera cDNA clone WIN0563_E04 3', mRNA sequence /clone=WIN0563_E04 /clone_end=3' /gb=EC954941

Domain Architecture

Myb_DNA-binding PF00249 GSVIVP00024297001
DomainStartEndBit scoreE-value
Myb_DNA-binding53958922.90.0013

Sequences