Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00024510001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00024510001
Family
NAC
3D structure (top 5)
1UT7
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis thaliana

AT3G04070.2 Score: 1
AT3G04070.1 Score: 0.975

Expression data

Expressed Sequence Tags

At.10430
Arabidopsis thaliana At1g61110 mRNA for unknown protein, complete cds, clone: RAFL19-05-K20 /cds=p(117,1088) /gb=AK117878
At.17802
Arabidopsis thaliana ANAC032 (Arabidopsis NAC domain containing protein 32); transcription factor (ANAC032) mRNA, complete cds /cds=p(76,837) /gb=NM_106394
At.20460
Arabidopsis thaliana ATNAC3 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 55); transcription factor (ATNAC3) mRNA, complete cds /cds=p(115,1068) /gb=NM_112418
At.24919
Arabidopsis thaliana unknown protein (At1g69490) mRNA, complete cds /cds=p(94,900) /gb=AF360201
Hv.1425
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf19c03, mRNA sequence /gb=AK249102
Hv.5097
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf97a05, mRNA sequence /gb=AK251058
Hv.6550
Hordeum vulgare subsp. vulgare mRNA for putative NAC transcription factor (nac4 gene) /cds=p(156,992) /gb=AM500853
Mtr.13202
MTYEA18TF JCVI-MT1 Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=EV260652
Mtr.14197
NF047H10EC1F1091 Elicited cell culture Medicago truncatula cDNA clone NF047H10EC 5', mRNA sequence /clone=NF047H10EC /clone_end=5' /gb=BF648589
Mtr.22324
EST315871 DSIR Medicago truncatula cDNA clone pDSIR-30G5, mRNA sequence /clone=pDSIR-30G5 /gb=AW560823
Mtr.4556
EST611106 KVKC Medicago truncatula cDNA clone pKVKC-7B8, mRNA sequence /clone=pKVKC-7B8 /gb=BQ165237
Os.17286
Oryza sativa Japonica Group cDNA, clone: J100075D15, full insert sequence /cds=p(172,1350) /gb=AK243514
Os.26695
RECm0544 A normalized whole-life-cycle cDNA library of rice Oryza sativa (indica cultivar-group) cDNA clone EI051E13, BI073B11, EI053I04, BI157H21, EI073L16, EI114F05, EI11 5', mRNA sequence /clone=EI051E13,_BI073B11,_EI053I04,_BI157H21,_EI073L16, _EI114F
Os.36437
Oryza sativa Japonica Group cDNA clone:001-115-A08, full insert sequence /gb=AK063406
Os.4384
Oryza sativa (japonica cultivar-group) NAC protein mRNA, complete cds /cds=p(105,1061) /gb=AY986504
Os.79631
Oryza sativa (japonica cultivar-group) Os12g0123700 (Os12g0123700) mRNA, complete cds /cds=p(1,1182) /gb=NM_001072566
Pth.8122
Populus trichocarpa clone WS01228_D08 unknown mRNA /cds=p(89,790) /gb=EF147142
Sbi.1157
RHOH1_8_B12.g1_A002 Acid- and alkaline-treated roots Sorghum bicolor cDNA clone RHOH1_8_B12_A002 5', mRNA sequence /clone=RHOH1_8_B12_A002 /clone_end=5' /gb=CN125046 /gi=45949087
Sbi.15189
OX1_57_D06.g1_A002 Oxidatively-stressed leaves and roots Sorghum bicolor cDNA clone OX1_57_D06_A002 5', mRNA sequence /clone=OX1_57_D06_A002 /clone_end=5' /gb=CN137491 /gi=45971143

Domain Architecture

NAM PF02365 GSVIVP00024510001
DomainStartEndBit scoreE-value
NAM11139291.71.6e-84

Sequences