Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00024582001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00024582001
Family
MYB-related
3D structure (top 5)
1H89 1H8A 2K9N 1GV2 2DIM
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis thaliana

AT5G41020.1 Score: 1

Carica papaya

evm.TU.supercontig_65.22 Score: 1

Physcomitrella patens

167888 Score: 1

Populus trichocarpa

554751 Score: 1

Sorghum bicolor

5007523 Score: 1

Expression data

Expressed Sequence Tags

At.30257
Arabidopsis thaliana myb family transcription factor (AT5G41020) mRNA, complete cds /cds=p(149,1915) /gb=NM_123467
Hv.28850
HDP26E06w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP26E06, mRNA sequence /clone=HDP26E06 /gb=EX580601
Os.18071
Oryza sativa (japonica cultivar-group) Os06g0303700 (Os06g0303700) mRNA, complete cds /cds=p(1,2154) /gb=NM_001063997
Pba.2568
WS01912.B21_E20 PT-DX-N-A-10 Populus trichocarpa cDNA clone WS01912_E20 3', mRNA sequence /clone=WS01912_E20 /clone_end=3' /gb=CV229126
Pth.2568
WS0252.B21_M11 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS0252_M11 3', mRNA sequence /clone=WS0252_M11 /clone_end=3' /gb=CV243760
Vvi.2197
VV_PEa24c08.g1 Vitis vinifera cv. perlette LibA Vitis vinifera cDNA, mRNA sequence /gb=EV227725
Vvi.5877
WIN074.C21_B02 Cab Sauv pericarp normalized (WIN07) Vitis vinifera cDNA clone WIN074_B02 3', mRNA sequence /clone=WIN074_B02 /clone_end=3' /gb=EC959271

Domain Architecture

Myb_DNA-binding PF00249 GSVIVP00024582001
DomainStartEndBit scoreE-value
Myb_DNA-binding47852227.55.4e-05

Sequences