Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00024595001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00024595001
Family
NAC
3D structure (top 5)
1UT7
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

At.17802
Arabidopsis thaliana ANAC032 (Arabidopsis NAC domain containing protein 32); transcription factor (ANAC032) mRNA, complete cds /cds=p(76,837) /gb=NM_106394
At.20460
Arabidopsis thaliana ATNAC3 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 55); transcription factor (ATNAC3) mRNA, complete cds /cds=p(115,1068) /gb=NM_112418
Hv.1425
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf19c03, mRNA sequence /gb=AK249102
Mtr.22324
EST315871 DSIR Medicago truncatula cDNA clone pDSIR-30G5, mRNA sequence /clone=pDSIR-30G5 /gb=AW560823
Mtr.4556
EST611106 KVKC Medicago truncatula cDNA clone pKVKC-7B8, mRNA sequence /clone=pKVKC-7B8 /gb=BQ165237
Os.26695
RECm0544 A normalized whole-life-cycle cDNA library of rice Oryza sativa (indica cultivar-group) cDNA clone EI051E13, BI073B11, EI053I04, BI157H21, EI073L16, EI114F05, EI11 5', mRNA sequence /clone=EI051E13,_BI073B11,_EI053I04,_BI157H21,_EI073L16, _EI114F
Os.4384
Oryza sativa (japonica cultivar-group) NAC protein mRNA, complete cds /cds=p(105,1061) /gb=AY986504
Sbi.15189
OX1_57_D06.g1_A002 Oxidatively-stressed leaves and roots Sorghum bicolor cDNA clone OX1_57_D06_A002 5', mRNA sequence /clone=OX1_57_D06_A002 /clone_end=5' /gb=CN137491 /gi=45971143
Vvi.13333
VVE004G09_148460 An expressed sequence tag database for abiotic stressed roots of Vitis vinifera var. Chardonnay Vitis vinifera cDNA clone VVE004G09 5, mRNA sequence /clone=VVE004G09 /clone_end=5' /gb=CB834298
Vvi.23623
sT7aVVM015J07024 VVM Vitis vinifera cDNA clone VVM015J07024 5' similar to emb_CAO39228.1 unnamed protein product [Vitis vinifera]. Expect = 5e-118, mRNA sequence /clone=VVM015J07024 /clone_end=5' /gb=FC066362

Domain Architecture

NAM PF02365 GSVIVP00024595001
DomainStartEndBit scoreE-value
NAM38165190.64.4e-54

Sequences