Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00025025001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00025025001
Family
SET
3D structure (top 5)
2R3A 2RFI 1ML9 3H6L 1MVH
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

481235 Score: 1

Arabidopsis thaliana

AT2G23740.1 Score: 1

Carica papaya

evm.TU.supercontig_15.86 Score: 1

Populus trichocarpa

218972 Score: 1

Sorghum bicolor

4884239 Score: 1

Zea mays

GRMZM2G172427_P01 Score: 1

Expression data

Expressed Sequence Tags

At.52882
Arabidopsis thaliana nucleic acid binding / transcription factor/ zinc ion binding (AT2G23740) mRNA, complete cds /cds=p(302,4429) /gb=NM_127937
Mtr.16015
EST305703 KV2 Medicago truncatula cDNA clone KV2-11C22, mRNA sequence /clone=KV2-11C22 /gb=AW299029
Os.47321
Oryza sativa Japonica Group cDNA clone:002-150-E07, full insert sequence /gb=AK108743
Os.54767
Oryza sativa Japonica Group cDNA clone:002-114-G07, full insert sequence /cds=p(333,1643) /gb=AK106720

Domain Architecture

Pre-SET PF05033 GSVIVP00025025001
DomainStartEndBit scoreE-value
Pre-SET1151128640.75.7e-09
SET12881434181.13.2e-51

Sequences