Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00025117001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00025117001
Family
C3H
3D structure (top 5)
2QXV 3EI4 2VDU 3EMH 1NR0
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

At.29648
Arabidopsis thaliana WD-40 repeat family protein / zfwd2 protein (ZFWD2), putative (AT5G51980) mRNA, complete cds /cds=p(181,1494) /gb=NM_124577
At.32255
Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH61ZD07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) /gb=BX828187
Hv.21110
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf171d02, mRNA sequence /gb=AK252654
Os.23123
Oryza sativa Japonica Group cDNA clone:J033090J15, full insert sequence /cds=p(295,1320) /gb=AK102324
Pth.2321
WS0231.B21_O21 PT-MB-A-13 Populus trichocarpa cDNA clone WS0231_O21 3', mRNA sequence /clone=WS0231_O21 /clone_end=3' /gb=CV239284
Ptp.815
T003G04 Populus apical shoot cDNA library Populus tremula x Populus tremuloides cDNA 5 prime, mRNA sequence /clone_end=5' /gb=BU830086
Sbi.10177
PI1_32_C10.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA, mRNA sequence /gb=BE366358
Vvi.1545
EST 3442 Veraison Grape berries Lambda Zap II Library Vitis vinifera cDNA clone TT273H07 3', mRNA sequence /clone=TT273H07 /clone_end=3' /gb=BQ794504

Domain Architecture

zf-CCCH PF00642 GSVIVP00025117001
DomainStartEndBit scoreE-value
zf-CCCH234813.40.025
WD405492277.8e-05
WD4017721332.51.6e-06
WD4021725327.26.6e-05

Sequences