Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00025371001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00025371001
Family
SNF2
3D structure (top 5)
3DMQ 2FWR 1Z3I 1Z5Z 1Z63
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

478644 Score: 1

Arabidopsis thaliana

AT3G12810.1 Score: 1

Micromonas sp. RCC299

104934 Score: 1
104935 Score: 0.987

Physcomitrella patens

30018 Score: 1

Populus trichocarpa

553466 Score: 1

Sorghum bicolor

144711 Score: 1

Zea mays

GRMZM2G126590_P03 Score: 1
GRMZM2G126590_P04 Score: 1

Expression data

Expressed Sequence Tags

At.39549
Arabidopsis thaliana PIE1 (PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1); ATP binding / DNA binding / helicase (PIE1) mRNA, complete cds /cds=p(595,6762) /gb=NM_112117
Os.17548
Oryza sativa Japonica Group cDNA clone:J023010H23, full insert sequence /gb=AK120785

Domain Architecture

SNF2_N PF00176 GSVIVP00025371001
DomainStartEndBit scoreE-value
SNF2_N2259338.21.7e-98
Helicase_C310388100.36.8e-27

Sequences