Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00025478001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00025478001
Family
C3H
3D structure (top 5)
1IB2 3BWT
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Expression data

Expressed Sequence Tags

At.51720
Arabidopsis thaliana APUM8 (ARABIDOPSIS PUMILIO 8); RNA binding (APUM8) mRNA, complete cds /cds=p(1,1548) /gb=NM_102074
At.52554
Arabidopsis thaliana APUM7 (ARABIDOPSIS PUMILIO 7); RNA binding (APUM7) mRNA, complete cds /cds=p(1,1953) /gb=NM_106466
At.55587
Arabidopsis thaliana APUM12 (ARABIDOPSIS PUMILIO 12); RNA binding (APUM12) mRNA, complete cds /cds=p(1,1791) /gb=NM_125034
Vvi.15036
CGF1000794_A10 Vitis vinifera cv. cabernet sauvignon Stem - CAST Vitis vinifera cDNA clone CAST0006_IF_A10 5', mRNA sequence /clone=CAST0006_IF_A10 /clone_end=5' /gb=CF211500

Domain Architecture

zf-CCCH PF00642 GSVIVP00025478001
DomainStartEndBit scoreE-value
zf-CCCH350375260.00015
PUF49653017.40.062
PUF53256651.72.8e-12
PUF57160519.90.01
PUF60864211.90.53
PUF64467835.42.2e-07
PUF68071322.30.002
PUF71675023.60.00079
PUF754788150.22

Sequences