Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00025574001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00025574001
Family
C2H2
3D structure (top 5)
1TF6 2GLI 1UBD 2CSH 2DLQ
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

903524 Score: 1

Arabidopsis thaliana

AT2G41835.1 Score: 1

Carica papaya

evm.TU.supercontig_92.40 Score: 1

Oryza sativa subsp. japonica

LOC_Os07g38240.1 Score: 1

Physcomitrella patens

130648 Score: 1

Sorghum bicolor

4876103 Score: 1

Zea mays

GRMZM2G081782_P01 Score: 1

Expression data

Expressed Sequence Tags

At.28535
Arabidopsis thaliana unknown protein (At2g41835) mRNA, complete cds /cds=p(141,980) /gb=AY065272
At.43073
Arabidopsis thaliana zinc finger (C2H2 type, AN1-like) family protein (AT3G57480) mRNA, complete cds /cds=p(236,985) /gb=NM_115608
Hv.14258
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf113d20, mRNA sequence /gb=AK251347
Mtr.19560
Medicago truncatula clone MTYFD_FE_FF_FG1G-B-14 unknown mRNA /cds=p(78,941) /gb=BT052570
Os.9772
Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRN113H10, full insert sequence /gb=CT829129
Pba.5915
WS02538.B21_N02 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02538_N02 3', mRNA sequence /clone=WS02538_N02 /clone_end=3' /gb=DT489289
Pth.5915
WS02514.B21.1_M16 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02514_M16 3', mRNA sequence /clone=WS02514_M16 /clone_end=3' /gb=CV242337

Domain Architecture

zf-AN1 PF01428 GSVIVP00025574001
DomainStartEndBit scoreE-value
zf-AN1135519.20.00035
zf-AN110414510.50.0042
zf-C2H225427720.20.0085

Sequences