Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00026185001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00026185001
Family
MYB-related
3D structure (top 5)
1IRZ 2CU7 2IW5 2YUM
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

904154 Score: 1

Arabidopsis thaliana

AT1G01060.1 Score: 1
AT1G01060.2 Score: 1
AT1G01060.3 Score: 1
AT1G01060.4 Score: 0.991

Oryza sativa subsp. japonica

LOC_Os08g06110.2 Score: 1
LOC_Os08g06110.3 Score: 1
LOC_Os08g06110.4 Score: 1
LOC_Os08g06110.5 Score: 1

Populus trichocarpa

731468 Score: 1

Sorghum bicolor

4890238 Score: 1

Expression data

Expressed Sequence Tags

At.21718
Arabidopsis thaliana myb family transcription factor (AT5G17300) mRNA, complete cds /cds=p(468,1631) /gb=NM_121736
Mtr.4052
EST5313267 GESD Medicago truncatula cDNA clone pGESD13G19 5' end, mRNA sequence /clone=pGESD13G19 /clone_end=5' /gb=BI311517
Os.14931
Oryza sativa Japonica Group cDNA, clone: J090053J23, full insert sequence /gb=AK242771
Pba.4208
WS01215.B21.1_D14 PT-GT-FL-A-3 Populus trichocarpa cDNA clone WS01215_D14 3', mRNA sequence /clone=WS01215_D14 /clone_end=3' /gb=CV234525
Pth.12623
Populus trichocarpa clone WS0127_E23 unknown mRNA /cds=p(338,2632) /gb=EF148067
Vvi.2856
WIN026.TB24.1_H14 Cab Sauv flower, leaf and root non-normalized (WIN02) Vitis vinifera cDNA clone WIN026_H14 3', mRNA sequence /clone=WIN026_H14 /clone_end=3' /gb=EC924737

Domain Architecture

Myb_DNA-binding PF00249 GSVIVP00026185001
DomainStartEndBit scoreE-value
Myb_DNA-binding246955.61.9e-13

Sequences