Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: GSVIVP00026201001

Identification

Species:
Vitis vinifera
Gene model
GSVIVP00026201001
Family
NAC
3D structure (top 5)
1UT7
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

At.1032
Arabidopsis thaliana putative NAC2 protein (At3g49530) mRNA, complete cds /cds=p(197,1606) /gb=AY059734
At.20744
Arabidopsis thaliana no apical meristem (NAM) family protein (AT4G35580) mRNA, complete cds /cds=p(58,1662) /gb=NM_001125650
At.40004
Arabidopsis thaliana ANAC014 (ANAC014) mRNA, complete cds /cds=p(29,1987) /gb=NM_202225
At.65025
Arabidopsis thaliana TIP mRNA, complete cds /cds=p(198,1553) /gb=AF281062
Hv.4825
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf54a18, mRNA sequence /gb=AK249749
Mtr.8273
EST645259 GPOD Medicago truncatula cDNA clone GPOD-34Z35, mRNA sequence /clone=GPOD-34Z35 /gb=CB066636
Os.8787
Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA203B11, full insert sequence /gb=CT832968
Os.89536
CR290197 Oryza sativa library (Han B) Oryza sativa cDNA clone y787d06p5, mRNA sequence /clone=y787d06p5 /gb=CR290197
Pth.11862
F111P59.3pR Populus flower cDNA library Populus trichocarpa cDNA clone F111P59 3', mRNA sequence /clone=F111P59 /clone_end=3' /gb=CK091605
Vvi.16729
CAP0002_IF_E11 Vitis vinifera cv. cabernet sauvignon (Clone 8) Petiole - CAP Vitis vinifera cDNA clone CAP0002_IF_E11 5', mRNA sequence /clone=CAP0002_IF_E11 /clone_end=5' /gb=CF515578

Domain Architecture

NAM PF02365 GSVIVP00026201001
DomainStartEndBit scoreE-value
NAM9139259.39.4e-75

Sequences